Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_008584.1 Length=152372 Score E Sequences producing significant alignments: (Bits) Value seq982 95.1 1e-14 >seq982 Length=16097 Score = 95.1 bits (104), Expect = 1e-14 Identities = 133/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 12068 TTGTTTTTCTCGACTTTTACATGAACTTCATCTCCAATTTCTCCATCTTCGTCTTTTATC 12127 || ||||| | |||||||| | |||| ||| || | ||| | ||||| ||| Sbjct 4949 TTATTTTTTGCAACTTTTACTTTTGTTTCACTTCCTATAACGTTATCACCATCTTTAATC 5008 Query 12128 G-GCTTTTTGCGC--ATATTAAGTCTAAGAGAGGAGAAAAATTTTAAAGCTCTACCACCT 12184 ||||||| | |||| |||||||| ||| | | ||||||||||| ||||||| Sbjct 5009 ACGCTTTTTCTTCTTATATCAAGTCTAACAGAAGCATAGAATTTTAAAGCATTACCACCA 5068 Query 12185 GGAGTGGTTTCTGGATTTCCATA---AACTCCTATTTTTTCACGAATTTGGTTAATAAAC 12241 | ||| ||||||||||||||| | ||| |||||||| ||| || ||||||||||| Sbjct 5069 GTAGTTGTTTCTGGATTTCCAAACATAACACCTATTTTCATACGGATCTGGTTAATAAAG 5128 Query 12242 ATTA 12245 |||| Sbjct 5129 ATTA 5132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487273209749280