Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq9465 96.9 3e-15
>seq9465
Length=7312
Score = 96.9 bits (106), Expect = 3e-15
Identities = 185/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 37826 CACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCA 37885
||| ||||| || ||||| || || ||||| ||| | | |||||||| |||||
Sbjct 6339 CACACACGAGGATTTATGGAATGCAGCACAAATACAGTTGAAAAGGGAGGGTAAAATGCA 6398
Query 37886 TCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC 37945
| | |||||||||||||||| || ||||| | |||||||| || | | |||
Sbjct 6399 TGGTTTTATGCGCATGTATTGGGCTAAAAAAATACTAGAATGGTCGGAAAGTCCAGAGAA 6458
Query 37946 CGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAA 38005
|| | | ||||| ||| | ||||| ||||| ||||||| ||||||| ||
Sbjct 6459 AGCTTTGGAAATTGCCATCTATTTGAATGACAAGTATGCGCTGGACGGCAGTGATCCTAA 6518
Query 38006 CGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGAT 38065
|||| || || ||| ||||||| || || || |||| ||| || ||| | || |
Sbjct 6519 TGGTTTTGTTGGTTGTATGTGGTCGATTTGTGGCATACATGATCAAGGATGGGGTGAAAG 6578
Query 38066 TCCCATTTACGGCAAGATTCGGTACATGAACTA 38098
| ||| || || || || |||||||||||
Sbjct 6579 AGCAGTTTTTGGTAAAATACGTTACATGAACTA 6611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396912147741298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |