Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq26883 89.7 6e-13
seq22196 82.4 8e-11
seq21925 82.4 8e-11
>seq26883
Length=1584
Score = 89.7 bits (98), Expect = 6e-13
Identities = 81/102 (79%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||||||||||||||||||| |||||||||||| |||||||| |||| || || |
Sbjct 673 ACGCAACACCAAATGCAATGTAGACTCCTTTTGAATGTTGTAATCGGCCAATGTGCGGCC 614
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094
|| || | ||||| |||||||| || | ||||| |||||
Sbjct 613 ATCCTCCAATTGCTTGCCAGCGAAAATCAAACGCTGTTGGTC 572
>seq22196
Length=2072
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1595 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1536
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 1535 TACTATCGAGGACTG 1521
>seq21925
Length=2106
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1629 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1570
Query 57067 TACTACCGAGGATTG 57081
||||| |||||| ||
Sbjct 1569 TACTATCGAGGACTG 1555
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543001972322160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |