Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4853 107 2e-18 >seq4853 Length=2014 Score = 107 bits (118), Expect = 2e-18 Identities = 194/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987 ||||| |||| || ||||||||| | || | || ||||||||| || |||||| Sbjct 1207 CCACAACTGTCCTCCTGTTTCCTGCTCACTATGGTTGCTGACTCCATCGAGGGTATTTTC 1148 Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047 | | | || | || || | ||||| || | ||| || || || || | | ||| Sbjct 1147 AAGTCCGTAGAGCAATGCGCCATGATCTCCAAGTCCGCAGGCGGCATTGGCCTGAATGTG 1088 Query 94048 CACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTC 94107 || | |||| |||| || | ||| || || ||||||||||| || || | Sbjct 1087 CATTGCATACGCGCCAAAGGCACGGGCATTGCTGGCACGAATGGCACCTCTAATGGTTTA 1028 Query 94108 GTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGG 94167 || |||||||| || || ||||| |||| ||||||||||||||| ||||| || || | Sbjct 1027 GTGCCTATGCTGCGTGTGTTCAATAACGTGGCGCGCTACGTGGATCAGGGAGGCGGCAAA 968 Query 94168 AGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGA 94211 | ||| | ||||| ||||| | || ||||||||| |||| Sbjct 967 CGTCCAGGTGCCTTCGCCATCTATTTGGAACCCTGGCACTCGGA 924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494531191742040