Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4853 107 2e-18
>seq4853
Length=2014
Score = 107 bits (118), Expect = 2e-18
Identities = 194/284 (68%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTC 93987
||||| |||| || ||||||||| | || | || ||||||||| || ||||||
Sbjct 1207 CCACAACTGTCCTCCTGTTTCCTGCTCACTATGGTTGCTGACTCCATCGAGGGTATTTTC 1148
Query 93988 GACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTC 94047
| | | || | || || | ||||| || | ||| || || || || | | |||
Sbjct 1147 AAGTCCGTAGAGCAATGCGCCATGATCTCCAAGTCCGCAGGCGGCATTGGCCTGAATGTG 1088
Query 94048 CACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTC 94107
|| | |||| |||| || | ||| || || ||||||||||| || || |
Sbjct 1087 CATTGCATACGCGCCAAAGGCACGGGCATTGCTGGCACGAATGGCACCTCTAATGGTTTA 1028
Query 94108 GTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGG 94167
|| |||||||| || || ||||| |||| ||||||||||||||| ||||| || || |
Sbjct 1027 GTGCCTATGCTGCGTGTGTTCAATAACGTGGCGCGCTACGTGGATCAGGGAGGCGGCAAA 968
Query 94168 AGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGA 94211
| ||| | ||||| ||||| | || ||||||||| ||||
Sbjct 967 CGTCCAGGTGCCTTCGCCATCTATTTGGAACCCTGGCACTCGGA 924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494531191742040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |