Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq9080 86.0 5e-12 >seq9080 Length=1412 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 69589 AGACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACAT-CGG 69647 |||| |||||||| | || || ||| | || ||||||||||| || || || || | Sbjct 786 AGACAATTTATTCACGTGTGGCGCGTATATGTAAAAATGATCATGGTGGGCCTTATACAC 727 Query 69648 TACTCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAA 69707 || || | | ||||| |||||||||||| | || || ||||| || |||| || ||| Sbjct 726 TA-TCCAAAAGTTGGACTTCATTTTTAAAGGCACGTCTCAATTGCTCAATGCCTGGAGAA 668 Query 69708 TTCCCCTTTTACTTTGACGAA 69728 || |||||||| ||||| ||| Sbjct 667 TTTCCCTTTTATTTTGATGAA 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408088716818264