Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2021 89.7 8e-13
>seq2021
Length=2943
Score = 89.7 bits (98), Expect = 8e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902
||||| || || || || || || | || ||| | | | || ||| ||||| ||||||
Sbjct 2149 TCCACAGTAAATTGTATAGCATTGGCAGCTGGCTTCGTGCGCAAATAATACATACCGGTC 2090
Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962
|| | ||| | ||| ||||| | || ||||| | |||||| | || || ||
Sbjct 2089 TTCAAGCCTGCTTTCCAACCGTAGAAATGTATGGATGTCAGTTTACCATAATTCGGCTCA 2030
Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATA 204022
|||| || ||||| | || || ||||| || || |||| | ||||| || |||||
Sbjct 2029 GCCACATGTATGTTAAACGATTGACTTTGATCTATAAAAGCACCACGATCAGCTGCCATT 1970
Query 204023 TTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTC 204069
|| ||| ||||| ||||||||||| || |||||| ||| |||
Sbjct 1969 TTAATAGACGTCTTAACAGAAATCTCCCAAACTGTCTTGTACAAGTC 1923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 794846590327440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |