Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_014036.1
Length=174436
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 141 1e-28
seq1262 100 3e-16
>seq2698
Length=11445
Score = 141 bits (156), Expect = 1e-28
Identities = 143/186 (77%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 51206 CCAACTGTTAAGGTGGAAGGTGGACAGCATTTAAACGTAAACGTGTTGCGCCGCGAAACT 51265
|| ||||| | || ||||||||||| |||||||| |||||||| | || |||||
Sbjct 5309 CCTACTGTAAGAGTTGAAGGTGGACAACATTTAAATGTAAACGTTCTTCGAAAAGAAACA 5368
Query 51266 CTCCTGGATGCGGTTGAACATCCTGAAAAATACCCACAGTTAACGATCCGTGTTTCTGGT 51325
|| || ||||| || |||||||||||||||||||| |||||||| || | ||||| ||
Sbjct 5369 CTTCTTGATGCAGTAGAACATCCTGAAAAATACCCGCAGTTAACAATTAGGGTTTCAGGA 5428
Query 51326 TATGCAGTGCGTTTTAACTCACTGACCCCTGAACAGCAACGCGACGTTATCGCCCGAACC 51385
||||| || | |||||||| | || |||||||| |||| || ||||| || ||||
Sbjct 5429 TATGCTGTTAGATTTAACTCTTTAACACCTGAACAACAACAAGATGTTATTACCAGAACT 5488
Query 51386 TTTACA 51391
|| |||
Sbjct 5489 TTCACA 5494
>seq1262
Length=72559
Score = 100 bits (110), Expect = 3e-16
Identities = 124/170 (73%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 94235 TTTATAAAATTCTTTACCAGACCCATTACAGCTACTGCATTTGGGGGAACGGTTGTTATC 94294
|||||| |||||| |||| |||||||| ||| ||||| || ||||| | | ||
Sbjct 20 TTTATATCGTTCTTTTCCAGTTCCATTACAAGAACTACATTTTGGTGAACGATGACTGTC 79
Query 94295 ATACCGCCCCGAACCGTTACATGCAACACATTTCCTTAATTTCCAGCCATACACGAACCT 94354
||||| || ||||||||||| ||||||||||| || ||||| | ||||| | || |
Sbjct 80 ATACCTTCCAGAACCGTTACAAGCAACACATTTTCTCAATTTAAATCCATATTCAAATTT 139
Query 94355 CATGTAATAATCGGTTCGTGCGGCCTTGCGTTCATGGAAATTCATGCTTT 94404
| |||| | |||| | | | || | |||||| |||||||||||||
Sbjct 140 AAAATAATGGTTCGTTCTTTCTTCTTTTCTTTCATGAAAATTCATGCTTT 189
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557850607143840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |