Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_014635.1
Length=163875
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 89.7 5e-13
>seq2789
Length=15484
Score = 89.7 bits (98), Expect = 5e-13
Identities = 203/304 (67%), Gaps = 1/304 (0%)
Strand=Plus/Minus
Query 131802 AAAGAAATCTATGACGGTATGCAAGCTTTCGAATACGAAGTCAACACGATGTTTACCACA 131861
|||||| | ||| | | | |||| || ||||| ||| | || || || |||| ||
Sbjct 3433 AAAGAATGTTTTGATGCTTTTCAAGGATTAGAATATGAAATTAATACTTTGCATACCGCA 3374
Query 131862 AATGGCCAAACACCGTTCGTGACAATTACATTTGGGATGGGAACTAACTGGTTCGAAAAA 131921
||||| ||||| || || || || || ||||| | |||| || |||| |
Sbjct 3373 AATGGACAAACCCCATTTGTTACTTTTGGTTTTGGACTTGGAATTACAAAAGAGGAAAGA 3314
Query 131922 GAAATTCAAAAAGCTATTTTGAAAGTACGAATCAAGGGTCTTGGAAAGAATGGCATCACA 131981
|||||||||| | || || | | |||| || || | ||||| ||| | ||
Sbjct 3313 TTAATTCAAAAATCAATATTAAGAAACAGAATAAATGGGTTAGGAAAAAATAAAAAAACG 3254
Query 131982 CCAGTATTTCCAAAAACTCGTTATGTTCATGGAAGCTGGTATAAACTTAAATCCTGGAGA 132041
|||||||||| |||||| ||| | ||| ||| || | ||| || | | | ||
Sbjct 3253 GCAGTATTTCC-AAAACTTGTTTTTGCCATAAAAGAAGGGACAAATAGAATTAATAGCGA 3195
Query 132042 TCCAAACTATGAAATTAAACACCTTGCTCTGGAATGTTCAGCCAAGCGAATGTACCCTGA 132101
||| || ||||| || ||||| || || || ||||||||| | | |||||||| |||||
Sbjct 3194 TCCTAATTATGATATAAAACAACTGGCGCTTGAATGTTCAACACAACGAATGTATCCTGA 3135
Query 132102 CATT 132105
|||
Sbjct 3134 TATT 3131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 524068523483400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |