Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq2789 89.7 5e-13 >seq2789 Length=15484 Score = 89.7 bits (98), Expect = 5e-13 Identities = 203/304 (67%), Gaps = 1/304 (0%) Strand=Plus/Minus Query 131802 AAAGAAATCTATGACGGTATGCAAGCTTTCGAATACGAAGTCAACACGATGTTTACCACA 131861 |||||| | ||| | | | |||| || ||||| ||| | || || || |||| || Sbjct 3433 AAAGAATGTTTTGATGCTTTTCAAGGATTAGAATATGAAATTAATACTTTGCATACCGCA 3374 Query 131862 AATGGCCAAACACCGTTCGTGACAATTACATTTGGGATGGGAACTAACTGGTTCGAAAAA 131921 ||||| ||||| || || || || || ||||| | |||| || |||| | Sbjct 3373 AATGGACAAACCCCATTTGTTACTTTTGGTTTTGGACTTGGAATTACAAAAGAGGAAAGA 3314 Query 131922 GAAATTCAAAAAGCTATTTTGAAAGTACGAATCAAGGGTCTTGGAAAGAATGGCATCACA 131981 |||||||||| | || || | | |||| || || | ||||| ||| | || Sbjct 3313 TTAATTCAAAAATCAATATTAAGAAACAGAATAAATGGGTTAGGAAAAAATAAAAAAACG 3254 Query 131982 CCAGTATTTCCAAAAACTCGTTATGTTCATGGAAGCTGGTATAAACTTAAATCCTGGAGA 132041 |||||||||| |||||| ||| | ||| ||| || | ||| || | | | || Sbjct 3253 GCAGTATTTCC-AAAACTTGTTTTTGCCATAAAAGAAGGGACAAATAGAATTAATAGCGA 3195 Query 132042 TCCAAACTATGAAATTAAACACCTTGCTCTGGAATGTTCAGCCAAGCGAATGTACCCTGA 132101 ||| || ||||| || ||||| || || || ||||||||| | | |||||||| ||||| Sbjct 3194 TCCTAATTATGATATAAAACAACTGGCGCTTGAATGTTCAACACAACGAATGTATCCTGA 3135 Query 132102 CATT 132105 ||| Sbjct 3134 TATT 3131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524068523483400