Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq1470 168 3e-36
seq13975 86.0 2e-11
>seq1470
Length=5781
Score = 168 bits (186), Expect = 3e-36
Identities = 444/670 (66%), Gaps = 31/670 (5%)
Strand=Plus/Plus
Query 450948 GTGTAGGTGTTTACCAAAATGGAAATGTAGAAATTATAGCAAATGACCAAGGATCACGAA 451007
|||| |||||||| | || ||| ||| |||||||| || || || ||||| || |
Sbjct 2336 GTGTTGGTGTTTATAAGAACGGACGTGTTGAAATTATTGCCAACGATCAAGGTAACCGTA 2395
Query 451008 CTACTCCTTCATGGGTAAGTTTTACGGATTCAGAAAGACTTTTA---GGGCAAGCTGCTA 451064
||||| |||| || |||| || | || || ||| || | || || |
Sbjct 2396 TCACTCCCTCATATGTTGGTTTCACAAGTGAAGGTGAACGTTTGATTGGTGATGCCGCCA 2455
Query 451065 AATCAAT--GGTAAATTCAAATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGG 451122
|| ||| | | | ||||| | | || ||||||| ||||| || ||||| |||||
Sbjct 2456 AA--AATCAGTTGACCACAAATCCAGAGAATACAGTATTCGATGCCAAGCGTTTGATTGG 2513
Query 451123 CCGTATGTATG--ATGATGATACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTA 451180
||| | ||| |||||| | ||| ||| | || | |||||||| | | | ||
Sbjct 2514 TCGT--GAATGGAATGATGCCAATGTGCAACATGACATCAAATTCTTCCCCTTCAAAGTG 2571
Query 451181 GTAAATCAAAAAGGA----AAGCCCTATATTCAAGT---AAATTATAAAGGTGAAACTAA 451233
||| ||||| | ||||| | |||||||| || || | | ||| || ||
Sbjct 2572 ----ATCGAAAAGAACTCCAAGCCACACATTCAAGTTCAAACTTCTCAGGGT---ACCAA 2624
Query 451234 AACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293
| ||||| ||||||||||| || | |||||| | ||||||||| || || || ||
Sbjct 2625 AGTGTTTGCACCTGAAGAAATCTCCGCCATGGTTTTGGGTAAAATGAAGGACACCGCTGA 2684
Query 451294 ACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGA 451353
| || | || || || |||| || | || || ||||| || || || ||
Sbjct 2685 AGCCTACTTGGGCAAGAAGGTCACCAATGCTGTGGTCACAGTACCCGCCTACTTTAACGA 2744
Query 451354 TGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAAT 451413
||| ||||| ||||| || ||||| || || |||||||||| | |||||| | || ||
Sbjct 2745 TGCTCAACGTCAAGCCACCAAAGACGCTGGCGTTATTGCTGGTCTTAATGTTATGCGTAT 2804
Query 451414 TATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGA 451473
|||||||| || || || ||||| |||| || || | ||| || | || |
Sbjct 2805 CATTAATGAGCCCACCGCTGCTGCCATAGCCTACGGTTT-GGACAAGAAGGAG-----GG 2858
Query 451474 AGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTC 451533
||||| ||| | || ||||| ||||| ||||| || ||| |||| || | | |
Sbjct 2859 TGAAAAGAATGTGTTGGTATTCGATTTGGGTGGTGGTACTTTTGATGTGTCACTCTTGAC 2918
Query 451534 AATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGA 451593
||||| | || ||||| || || ||| ||||| |||||||||||| | || |||||
Sbjct 2919 CATTGACAACGGTGTATTCGAGGTGGTGGCCACCAACGGTGATACTCATTTGGGTGGTGA 2978
Query 451594 AGATATTGAT 451603
|||| | |||
Sbjct 2979 AGATTTCGAT 2988
>seq13975
Length=1469
Score = 86.0 bits (94), Expect = 2e-11
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973
||||||||||||||| | |||||||| | || ||||| ||||| | ||| |||||||
Sbjct 1283 GCAATTGGAATTGATTTGGGAACCACATACTCCTGTGTTGGTGTCTTTCAACATGGAAAA 1342
Query 450974 GTAGAAATTATAGCAAATGACCAAGGA 451000
|||||||| || || || |||||||||
Sbjct 1343 GTAGAAATAATTGCCAACGACCAAGGA 1369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974932428967292
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |