Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq2698 116 4e-21 >seq2698 Length=11445 Score = 116 bits (128), Expect = 4e-21 Identities = 151/208 (73%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 61988 ATTACATTTCCTTGGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAG 62047 |||| ||| || |||||||| | | |||||| || | || ||||| | || | || Sbjct 5507 ATTATATTGATTTTGTGAAAGTTCTGGTAATAACATCTTGTTGTTGTTCAGGTGTTAAAG 5448 Query 62048 AATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGAT 62107 | ||||||| |||||||| || ||||| | ||| || | ||| || |||||||| |||| Sbjct 5447 AGTTAAATCTAACAGCATATCCTGAAACCCTAATTGTTAACTGCGGGTATTTTTCAGGAT 5388 Query 62108 GTTGAACTGCATCTTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCAC 62167 ||| |||||||| | |||||||| ||||| || || || | |||||| |||| Sbjct 5387 GTTCTACTGCATCAAGAAGTGTTTCTTTTCGAAGAACGTTTACATTTAAATGTTGTCCAC 5328 Query 62168 CTTCAACTTTAACTACAGGTTGACTTTC 62195 |||||||| | ||||| ||||||| Sbjct 5327 CTTCAACTCT---TACAGTAGGACTTTC 5303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529394455620000