Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_016071.1
Length=145964
Score E
Sequences producing significant alignments: (Bits) Value
seq6803 100 3e-16
seq27881 93.3 4e-14
>seq6803
Length=1108
Score = 100 bits (110), Expect = 3e-16
Identities = 78/92 (85%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 65857 CGTTAATTCTGGTGCAGGTGACGAGACTCGAACTCGTAATCATTTAAG-CGGGAGATTTT 65915
||| |||| |||| | || | ||||||||||||| ||||| || | |||||||||||
Sbjct 120 CGTAAATTTTGGTACCAGTAATGAGACTCGAACTCATAATCCACTAGGGCGGGAGATTTT 179
Query 65916 AAGTCTCCTGTGTATCTCCATTTCCACCACAC 65947
||||||||||||||| ||||||||||||||||
Sbjct 180 AAGTCTCCTGTGTATTTCCATTTCCACCACAC 211
>seq27881
Length=1164
Score = 93.3 bits (102), Expect = 4e-14
Identities = 73/86 (85%), Gaps = 1/86 (1%)
Strand=Plus/Minus
Query 65863 TTCTGGTGCAGGTGACGAGACTCGAACTCGTAATCATTTAAG-CGGGAGATTTTAAGTCT 65921
|| |||| | || | ||||||||||||| ||||| || | |||||||||||||||||
Sbjct 787 TTTTGGTACCAGTAATGAGACTCGAACTCATAATCCACTAGGGCGGGAGATTTTAAGTCT 728
Query 65922 CCTGTGTATCTCCATTTCCACCACAC 65947
||||||||| ||||||||||||||||
Sbjct 727 CCTGTGTATTTCCATTTCCACCACAC 702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 466775568228960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |