Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_016073.1
Length=157950
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 105 7e-18
seq2410 104 2e-17
>seq1262
Length=72559
Score = 105 bits (116), Expect = 7e-18
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 137450 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137508
|||||| ||||||||| |||||||||| ||||||||||||| | |||||||||||||||
Sbjct 63894 GGCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTGGTTCAAG 63835
Query 137509 TCCAGCCAGGGTCACCACTAAATAA 137533
|||||| ||| ||||| |||||||
Sbjct 63834 TCCAGCAGGGGCCACCAATAAATAA 63810
Score = 84.2 bits (92), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 137450 GGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137508
||| || ||||||||| |||||||||| ||||||||||||| | |||||||||||||||
Sbjct 64479 GGCTCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTGGTTCAAG 64420
Query 137509 TCCAGC 137514
||||||
Sbjct 64419 TCCAGC 64414
>seq2410
Length=3205
Score = 104 bits (114), Expect = 2e-17
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 137451 GCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAGT 137509
||||| ||||||||| |||||||||| ||||||||||||| | ||||||||||||||||
Sbjct 951 GCCCCTTAGCTCAGTTGGTTAGAGCAAACGACTCATAATCGTTAGGTCGCTGGTTCAAGT 1010
Query 137510 CCAGCCAGGGTCACCACTAAATAA 137533
||||| ||| ||||| |||||||
Sbjct 1011 CCAGCAGGGGCCACCAATAAATAA 1034
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 137443 AAATTTTGGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTG 137501
||| || | |||| ||||||||| |||||||||| ||||||||||||| | ||||||||
Sbjct 1774 AAAGTTAGCCCCCTTAGCTCAGTTGGTTAGAGCACACGACTCATAATCGTTAGGTCGCTG 1833
Query 137502 GTTCAAGTCCAGC 137514
|||||||||||||
Sbjct 1834 GTTCAAGTCCAGC 1846
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 137449 TGGCCCCGTAGCTCAGT-GGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAA 137507
|| |||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||
Sbjct 2301 TGCCCCCTTAGCTCAGTTGGTTAGAGCATACGACTCATAATCGTCAGGTCGCTGGTTCAA 2360
Query 137508 GTCCAGCCAGGGTCACCA 137525
||||||| | | |||||
Sbjct 2361 GTCCAGCAGGAGGCACCA 2378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505115882096400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |