Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq15839 111 6e-20 >seq15839 Length=1484 Score = 111 bits (122), Expect = 6e-20 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 52240 CATCTGGAGTGGCGAAAGCACGTCGGGGAAATCCTCTGGTACAAGTTCGAGGGCGTGAAG 52299 ||||| ||| ||| |||| | ||||||||| ||||||||| ||||| || |||| Sbjct 8 CATCTTGAGCTGCGCAAGCGGGCAGGGGAAATCGCCTGGTACAAATTCGAAGGGCTGAAA 67 Query 52300 CTCCGTCTGGCTGACAACACCTTCTACACCTGCGACTATTTCGTCATGCTCGCGAACGGC 52359 || || ||||| |||||||||||||||| | || | ||||| |||||| | ||| Sbjct 68 CTGCGCCTGGCGGACAACACCTTCTACAGCCCGGATTTCTTCGTAATGCTCAGCAGCGGT 127 Query 52360 CAGCTGGAGGCCCACGAGGTGAAAGG 52385 |||||||||||||||| || ||||| Sbjct 128 GAGCTGGAGGCCCACGAAGTCAAAGG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194091610693288