Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq1262 87.8 2e-12 >seq1262 Length=72559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 147058 TGGTATAGTGGTTGTGCCTTAGCCTTCCAAGCTAATGAGTCCGGTTCGATCCCGGATGTC 147117 ||||||||||| ||||||||||||||||||||||||||| || ||||||||| || | Sbjct 60225 TGGTATAGTGGCTGTGCCTTAGCCTTCCAAGCTAATGAGACCAGTTCGATCCTGGTAACC 60166 Query 147118 CGCTCCAA 147125 |||||||| Sbjct 60165 CGCTCCAA 60158 Score = 82.4 bits (90), Expect = 7e-11 Identities = 51/55 (93%), Gaps = 0/55 (0%) Strand=Plus/Minus Query 147058 TGGTATAGTGGTTGTGCCTTAGCCTTCCAAGCTAATGAGTCCGGTTCGATCCCGG 147112 ||||||||||| ||||||||||||||||||||||||||| || ||||||||| || Sbjct 60671 TGGTATAGTGGCTGTGCCTTAGCCTTCCAAGCTAATGAGACCAGTTCGATCCTGG 60617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477360258583320