Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_017974.1
Length=149273
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 87.8 2e-12
>seq1262
Length=72559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 147058 TGGTATAGTGGTTGTGCCTTAGCCTTCCAAGCTAATGAGTCCGGTTCGATCCCGGATGTC 147117
||||||||||| ||||||||||||||||||||||||||| || ||||||||| || |
Sbjct 60225 TGGTATAGTGGCTGTGCCTTAGCCTTCCAAGCTAATGAGACCAGTTCGATCCTGGTAACC 60166
Query 147118 CGCTCCAA 147125
||||||||
Sbjct 60165 CGCTCCAA 60158
Score = 82.4 bits (90), Expect = 7e-11
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Minus
Query 147058 TGGTATAGTGGTTGTGCCTTAGCCTTCCAAGCTAATGAGTCCGGTTCGATCCCGG 147112
||||||||||| ||||||||||||||||||||||||||| || ||||||||| ||
Sbjct 60671 TGGTATAGTGGCTGTGCCTTAGCCTTCCAAGCTAATGAGACCAGTTCGATCCTGG 60617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477360258583320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |