Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_017985.1
Length=40128
Score E
Sequences producing significant alignments: (Bits) Value
seq6609 140 8e-29
>seq6609
Length=13971
Score = 140 bits (154), Expect = 8e-29
Identities = 188/262 (72%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 1509 TAAATTCTACCAATATATTCTCCAAGAATACCTATTCCTATCAATTGAACGCCACCCAGG 1568
|| ||||| || ||||||||||| | | |||| |||||| ||||| | ||||| |
Sbjct 5650 TATATTCTTCCTATATATTCTCCCATTACTCCTAATCCTATTAATTGTATTCCACCTATA 5709
Query 1569 AAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAACATTATTTCCAAATATTAATTTA 1628
|| || | |||| | |||||| || |||| || |||||||||||||| | ||||
Sbjct 5710 AATGTAATTGCTACAAATAAAGACGGATAACCAGCAATATTATTTCCAAATAACATTTTA 5769
Query 1629 TCAATAATCATCCATGCACCGTAAAGGAATGACATACCTGCAATAAACAATCCAATGTAA 1688
|| ||||| || || ||| || || ||| || || || ||||| ||||||
Sbjct 5770 TCTATAATTATTTTAAATCCAAAAATAAAAGAAATAGAGGCCATTAAAAATCCGATGTAA 5829
Query 1689 GTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTATTCCTTCCAGCGCCAGATTCCAT 1748
|||||| | || |||| ||| || |||||||||||||| | ||||| |||||||
Sbjct 5830 CACCATATTCTAAGTGGAATTGTGCTAAATGAAGTTATTCCTTCTACCGCCAAATTCCAT 5889
Query 1749 AATTTCCAGCCATTGAATTTTG 1770
|| ||||| |||| |||||||
Sbjct 5890 AACTTCCATGCATTAAATTTTG 5911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 128240699332420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |