Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_018837.1
Length=122024
Score E
Sequences producing significant alignments: (Bits) Value
seq2305 84.2 2e-11
>seq2305
Length=5865
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/102 (79%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 32504 TGAGACTTGAACTCATAACCTATCGCTTAAGAGGCGAGTGCTCTAACCAGTTGAGCTAGC 32563
|| ||||||||| || |||||||||||||| |||||||||||||||||| ||||||||
Sbjct 5181 TGGGACTTGAACCCAAAACCTATCGCTTAAAAGGCGAGTGCTCTAACCA-TTGAGCTACG 5123
Query 32564 AAGC---AATTGTTTGGTAAAGAGTATAGGATTTTAACCTAT 32602
| | | || | |||| | |||||||||| |||||||
Sbjct 5122 GATCTATATTTTTCTGGTGCATTGTATAGGATTCGAACCTAT 5081
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/102 (79%), Gaps = 4/102 (4%)
Strand=Plus/Minus
Query 32504 TGAGACTTGAACTCATAACCTATCGCTTAAGAGGCGAGTGCTCTAACCAGTTGAGCTAGC 32563
|| ||||||||| || |||||||||||||| |||||||||||||||||| ||||||||
Sbjct 5433 TGGGACTTGAACCCAAAACCTATCGCTTAAAAGGCGAGTGCTCTAACCA-TTGAGCTACG 5375
Query 32564 AAGC---AATTGTTTGGTAAAGAGTATAGGATTTTAACCTAT 32602
| | | || | |||| | |||||||||| |||||||
Sbjct 5374 GATCTATATTTTTCTGGTGCATTGTATAGGATTCGAACCTAT 5333
Score = 82.4 bits (90), Expect = 6e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 32504 TGAGACTTGAACTCATAACCTATCGCTTAAGAGGCGAGTGCTCTAACCAGTTGAGCTA 32561
|| ||||||||| || |||||||||||||| |||||||||||||||||| ||||||||
Sbjct 4197 TGGGACTTGAACCCAAAACCTATCGCTTAAAAGGCGAGTGCTCTAACCAATTGAGCTA 4140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 390204287021665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |