Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_019402.1
Length=76631
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 104 1e-17
>seq2789
Length=15484
Score = 104 bits (114), Expect = 1e-17
Identities = 230/345 (67%), Gaps = 0/345 (0%)
Strand=Plus/Plus
Query 46494 CGTTGTCCCACCGTACTGGTGAGAAGCAACTTGAGCGGTAATCTGAGCCATTACTGCACA 46553
|||||| ||||| || ||| || ||||| || | || ||||| ||| ||
Sbjct 3554 CGTTGTTCCACCATAAGTATGACTTGCGACTTGCGCTATTATTTGAGCAGTTATAGCCGT 3613
Query 46554 TGCCACACCAATAGATTTGGGTGATTCGATTTGAGCATTACCTAACTTGAAGCCATTTTC 46613
||| ||||| || || | ||| |||| |||||| |||| || |||||| |||
Sbjct 3614 TGCTGTTCCAATTGAACGTGGAGTTTCAATTTCAGCATTTCCTATTTTAAAGCCACCTTC 3673
Query 46614 CAACATACCTTTGAGGTCAACCAAACAGCAGTTGGTCATAGGTAGGAATGGAGAGTAGTC 46673
| ||| ||||| | ||||| || || || ||| || | ||||| || || ||
Sbjct 3674 AAGCATTCCTTTTAAATCAACTAACATACAATTAAACATTGGAAAAAATGGTGAATAATC 3733
Query 46674 CAAATCGTGGTAATGAATTTCGCCTCTCTCGTGAGCATCAACAATGTCCCGAGGAAGAAT 46733
||||| || ||||||||||| ||| | || ||||| ||||| | ||| ||||| ||
Sbjct 3734 TAAATCATGATAATGAATTTCACCTTTTTCATGAGCGTCAACTACGTCTTTGGGAAGTAT 3793
Query 46734 GTAGTTGCGAGCGAAATGCTTAGAAACAACGCCGGCAAGTAAATCTCGCTGTACAGGGAA 46793
| || ||| |||| ||||||| | || || | ||||||| || || |
Sbjct 3794 ATGATTTTTAGCATAATGTTTAGAAATTATACCAGCTAACAAATCTCTTTGAGTTGGAAT 3853
Query 46794 GACTTTGGCATCCTTGTTAGCGTTTTCTTTGAGGATTGATTCATC 46838
|| ||| ||| || ||||| ||||| || || || |||| |||
Sbjct 3854 AACATTGCTATCTTTATTAGCATTTTCATTTAGTATGGATTTATC 3898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 245001653904688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |