Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq9716 114 4e-21 seq4088 89.7 1e-13 seq17421 87.8 5e-13 >seq9716 Length=2276 Score = 114 bits (126), Expect = 4e-21 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 12632 GCGATGTACAGCAATGACCCTGGGCACGACAAGCGGTGGCGAGCTGACGCAATCCCCTGG 12691 || || ||||||||||| | | |||| ||| ||||| ||||| || ||||| ||| Sbjct 3 GCCATTTACAGCAATGATGCCGCACACGCTAAGTCATGGCGCGCTGATGCCATCCCATGG 62 Query 12692 TCTGAGCACAACACTGAGGCATTCGCCGGACTACACAACGAGCGCAAACGCATCATCGTG 12751 || ||| ||||||| ||||| |||||||| || ||||||||||| || ||||||||| || Sbjct 63 TCAGAGAACAACACCGAGGCGTTCGCCGGCCTGCACAACGAGCGAAAGCGCATCATCCTG 122 Query 12752 GTATTCGA 12759 ||||||| Sbjct 123 ATATTCGA 130 >seq4088 Length=5036 Score = 89.7 bits (98), Expect = 1e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 14417 TTCTGGCGTGGCATGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTG 14476 || ||| | | | ||| ||| ||||||| |||||| ||||||||||||||||||||||| Sbjct 4327 TTTTGGTGCGCCGTGCTGGACTCGAACCAGCGACCTACCGCTTAGAAGGCGGTTGCTCTA 4268 Query 14477 TCCAACTGAGCTAA 14490 |||||||||||||| Sbjct 4267 TCCAACTGAGCTAA 4254 >seq17421 Length=2767 Score = 87.8 bits (96), Expect = 5e-13 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 14430 TGCAGGATTCGAACCTGCGACCAACCGCTTAGAAGGCGGTTGCTCTGTCCAACTGAGCTA 14489 ||| ||||| ||||| |||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 2557 TGCTGGATTTGAACCAGCGACCTACCGCTTAGAAGGCGGTTGCTCTATCCAACTGAGCTA 2616 Query 14490 A 14490 | Sbjct 2617 A 2617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143134405894948