Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_019485.1 Length=59080 Score E Sequences producing significant alignments: (Bits) Value seq2410 82.4 3e-11 >seq2410 Length=3205 Score = 82.4 bits (90), Expect = 3e-11 Identities = 110/151 (73%), Gaps = 4/151 (3%) Strand=Plus/Plus Query 55554 TAGCTCAGTTTGGTAGAGTGTCTGCTTTGGGAGCAGAATGTCGTTGGTTCAAGTCCAGCT 55613 |||||||||| | ||||| |||| || ||||| | ||| | ||||| | ||| | Sbjct 880 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCATAGGTTCGAATCC---T 936 Query 55614 ATCCCGACCAATTAGTGCCTTTAGCTCAGACGGTTAGAGCAGCCGACTCATAATCGGTAG 55673 || | | | | | || ||||||||| |||||||||| ||||||||||||| ||| Sbjct 937 ATACAG-CGTACCACGCCCCTTAGCTCAGTTGGTTAGAGCAAACGACTCATAATCGTTAG 995 Query 55674 GTCACAGGTTCAAATCCTGTAGGGCGCACCA 55704 ||| | ||||||| ||| | |||| ||||| Sbjct 996 GTCGCTGGTTCAAGTCCAGCAGGGGCCACCA 1026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188864738587796