Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq4088 93.3 4e-14 seq17421 84.2 2e-11 >seq4088 Length=5036 Score = 93.3 bits (102), Expect = 4e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113 |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct 4255 TAGCTCAGTTGGATAGAGCAACCGCCTTCTAAGCGGTAGGTCGCTGGTTCGAGTCCAGC 4313 >seq17421 Length=2767 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 17055 TAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGCTGGTTCGAGTCCAGC 17113 |||||||||||||||||||||| ||||||||||| || |||||||||||| | |||||| Sbjct 2616 TAGCTCAGTTGGATAGAGCAACCGCCTTCTAAGCGGTAGGTCGCTGGTTCAAATCCAGC 2558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516279547656000