Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_019530.1
Length=157785
Score E
Sequences producing significant alignments: (Bits) Value
seq4032 95.1 1e-14
seq1262 87.8 2e-12
>seq4032
Length=2654
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 137813 TAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGCCA 137872
||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct 1305 TAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAAGTTCGAGTCTTGCAT 1364
Query 137873 TCGTCGCCAAAT 137884
||||||||||
Sbjct 1365 GGGTCGCCAAAT 1376
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 137813 TAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGCCA 137872
||||||||| |||||||||||||||||||||||||||||||||| |||| |||| |||
Sbjct 1568 TAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCAAGTTCGAGTCTTGCAT 1627
Query 137873 TCGTCGCCAAAT 137884
||||||||||
Sbjct 1628 GGGTCGCCAAAT 1639
>seq1262
Length=72559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 137813 TAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCGCAGGTTCAAGTCCTGC 137870
||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct 60811 TAGTTCAGTTGGTAGAACGGTGGACTGTTAATCCATATGTCGCTGGTTCGAGTCCAGC 60754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 504588087019800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |