Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_019909.1
Length=168809
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 96.9 4e-15
seq2410 95.1 1e-14
>seq1262
Length=72559
Score = 96.9 bits (106), Expect = 4e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 74901 TTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTAAC 74960
|||||||||| | ||||| ||||||||| |||| | ||||||||||||| |||||||||
Sbjct 63817 TTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAAC 63876
Query 74961 CATCTGAGCTAAAGGGCC 74978
|| ||||||||| |||||
Sbjct 63877 CAACTGAGCTAAGGGGCC 63894
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 74914 CTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTAACCATCTGAGCTAAA 74973
||||| ||||||||| |||| | ||||||||||||| ||||||||||| |||||||||
Sbjct 64415 CTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACCAACTGAGCTAAG 64474
Query 74974 GGGCCTTTGTTTA 74986
| |||||| ||||
Sbjct 64475 GAGCCTTTATTTA 64487
>seq2410
Length=3205
Score = 95.1 bits (104), Expect = 1e-14
Identities = 67/77 (87%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 74901 TTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTAAC 74960
|||||||||| | ||||| ||||||||| |||| | ||||||||||||| |||||||||
Sbjct 1027 TTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTTTGCTCTAAC 968
Query 74961 CATCTGAGCTAAAGGGC 74977
|| ||||||||| ||||
Sbjct 967 CAACTGAGCTAAGGGGC 951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539851195652760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |