Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq4853 181 1e-40
seq2021 158 1e-33
seq1845 150 2e-31
seq24243 138 1e-27
>seq4853
Length=2014
Score = 181 bits (200), Expect = 1e-40
Identities = 636/972 (65%), Gaps = 27/972 (3%)
Strand=Plus/Minus
Query 75597 CCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGA 75655
|| |||| |||| |||||||| ||||| | ||||| | ||||| | || || | ||
Sbjct 957 CCTTCGCCATCTATTTGGAACCCTGGCACTCGGATATATTTGAGTTTTTGGATTTGAAGA 898
Query 75656 CTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCC 75714
| | || | |||||| ||| || | ||||| | || | | |||||||| ||
Sbjct 897 AAAATACT-GGCAAGGAAGAGTATCG-TGCACGAGATTTATTCTATGCTCTGTGGATACC 840
Query 75715 AGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAA 75774
||| | |||||||| || || |||| | ||| | ||||| || | || ||| ||||
Sbjct 839 CGACTTGTTCATGAAACGTGTGGAGGCAGATGGCGATTGGTCACTCATGTGCCCACACAA 780
Query 75775 GGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA 75834
| || || || || | |||||| || || || || || || |||||
Sbjct 779 GTGCCCCGGACTACATGAAGTTTGGGGTGAAGAATTCGAGCAACTTTATGAGAAATATGA 720
Query 75835 AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCA 75893
|| ||| | |||||| ||||| ||| | | || ||| || ||| |
Sbjct 719 GCGTGAAGGTCGTGCCAATCGCACTGTTAAAGCT-CAAACCTTGTGGTTTGCCATTATAG 661
Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953
| | || ||| ||||| || ||||||||||| || |||||||||||||| ||||
Sbjct 660 AGGCTCAAGTGGAAACTGGCACTCCATATATGCTCTATAAGGATGCTTGTAATCGCAAGA 601
Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013
|||| ||| ||||| | || || |||||| || ||| | ||||| |||||| |||| |
Sbjct 600 GTAATCAACAGAATCTAGGCACTATCAAGTGCAGCAATTTATGCACTGAAATTGTAGAAT 541
Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATG 76073
| | | |||||| | |||||||| ||||| || ||||| || || | || ||
Sbjct 540 ATTCGGCACCGGATGAAATTGCTGTTTGTAATTTAGCCTCAATTGCACTCAATATGTTTG 481
Query 76074 TCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTA 76133
|||| ||| | |||| ||||| | ||||||| | ||| | | || ||||| |
Sbjct 480 TCAACCCAGACA---AGACTTATGATTTTAAAAAACTCAAAGAAGTTGCTAAAATTGTAA 424
Query 76134 CCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG- 76192
| ||| | ||| | |||| |||| |||| || |||| | | | | | |||
Sbjct 423 CACGTAATTTGAACAAAATCATAGACATCAATTACTA-CCCGCT--GCCGGAGGCCAAGC 367
Query 76193 --TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTA 76250
|| |||||||| || | || || ||| | || || ||||| |||| |||| ||| |
Sbjct 366 GTTCAAATATGCGTCATCGTCCCATAGGTATTGGAGTACAAGGATTCGCAGATGCATTGA 307
Query 76251 TTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTG 76310
| | || || ||| ||| || ||||| || | ||| | || ||||
Sbjct 306 TACTCATGCGTTATCCATATGAAAGTGAGGAAGCATTTAAGCTAAATCAACAAATATTTG 247
Query 76311 AAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCT 76370
|||| || ||| | | || |||| || || ||||| |||||||| | ||| |||
Sbjct 246 AAACGATTTATTATGGTGCCTTGGAAGCCAGCTGTGAGTTGGCTGAGAAGCTGGGTCCCT 187
Query 76371 ATGAGACATTTGAGGGTTCTCCCGCGTC-CCAAGGG-GTGCTTCAGTTTGATATGTGGGA 76428
|||| || | || ||| ||| | ||| |||||| | | |||| |||||||||| |
Sbjct 186 ATGAAACTTATGCGGG--CTCACCTGTCAGCAAGGGAATTTTACAGTATGATATGTGGCA 129
Query 76429 AGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAG 76486
| | ||| | || | ||| | | |||| | || ||||| || | |
Sbjct 128 A-AAAACACCTA-CTGATCTATGGAATTGGGCGGAGCTGAAGGAGAAAATTGCTAAACAT 71
Query 76487 GGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCT 76544
|| | |||| | ||||| | || ||||||||||| ||||||||||| |||||||||
Sbjct 70 GGCGTGCGTA--ATTCTTTGCTCATTGCACCAATGCCTACAGCCTCCACTGCACAAATCA 13
Query 76545 TGGGTAATAATG 76556
|||| |||||||
Sbjct 12 TGGGCAATAATG 1
>seq2021
Length=2943
Score = 158 bits (174), Expect = 1e-33
Identities = 658/1024 (64%), Gaps = 46/1024 (4%)
Strand=Plus/Plus
Query 75597 CCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTT-ACGA 75655
|| |||| |||| || ||||| ||||| | ||||| | ||||| | || || | ||
Sbjct 755 CCTTCGCCATCTATTTAGAACCCTGGCACTCGGATATATTTGAGTTTTTGGATTTGAAGA 814
Query 75656 CTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCC 75714
| | || | |||||| ||| || | ||||| | |||| | || ||||| ||
Sbjct 815 AAAATACT-GGCAAGGAAGAGTATCG-TGCACGAGATTTATTTTATGCTCTATGGATACC 872
Query 75715 AGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAA 75774
||| | |||||||| || || |||| | ||| | ||||| || | || ||| ||||
Sbjct 873 CGACTTATTCATGAAACGTGTGGAGGCAGATGGCGATTGGTCACTCATGTGCCCACACAA 932
Query 75775 GGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGA 75834
| || || || || | |||||| || || || || || || |||||
Sbjct 933 GTGCCCCGGACTACATGAAGTTTGGGGTGAAGAATTCGAGCAACTTTATGAGAAATATGA 992
Query 75835 AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCA 75893
|| ||| | |||||| ||||| ||| | | || ||| || ||| |
Sbjct 993 GCGTGAAGGTCGTGCCAATCGCACTGTTAAAGCT-CAAACCTTGTGGTTTGCCATTATAG 1051
Query 75894 AATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGA 75953
| | ||| ||| ||||| || ||||||||||| || |||||||||||||| ||||
Sbjct 1052 AGGCTCAGGTGGAAACTGGCACTCCATATATGCTCTATAAGGATGCTTGTAATCGCAAGA 1111
Query 75954 GTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGT 76013
|||| ||| ||||| | || || |||||| || ||| | ||||| |||||| |||| |
Sbjct 1112 GTAATCAACAGAATCTAGGCACTATCAAGTGCAGCAATTTATGCACTGAAATTGTAGAAT 1171
Query 76014 ACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATG 76073
| | | |||||| | |||||||| ||||| || ||||| || || | || ||
Sbjct 1172 ATTCGGCACCGGATGAAATTGCTGTTTGTAATTTAGCCTCAATTGCACTCAATATGTTTG 1231
Query 76074 TCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTA 76133
|||| ||| | |||| ||||| | ||||||| | ||| | | || ||||| |
Sbjct 1232 TCAACCCAGACA---AGACTTATGATTTTAAAAAACTCAAAGAAGTTGCTAAAATTGTAA 1288
Query 76134 CCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAG- 76192
| ||| | ||| | |||| |||| |||| || |||| | | | | | |||
Sbjct 1289 CACGTAATTTGAACAAAATCATAGACATCAATTACTA-CCCGCT--GCCGGAGGCCAAGC 1345
Query 76193 --TCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTA 76250
|| |||||||| || | || || ||| | || || ||||| |||| |||| ||| |
Sbjct 1346 GTTCAAATATGCGTCATCGTCCCATAGGTATTGGCGTACAAGGATTCGCAGATGCATTAA 1405
Query 76251 TTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTG 76310
| | || || ||| ||| || ||||| || | ||| | || ||||
Sbjct 1406 TACTCATGCGTTATCCATATGAAAGTGAGGAAGCATTTAAGCTAAATCAACAAATATTTG 1465
Query 76311 AAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCT 76370
|||| || ||| | | || |||| || || ||||| |||||||| | ||| |||
Sbjct 1466 AAACGATTTATTATGGTGCCTTGGAAGCCAGCTGTGAGTTGGCTGAGAAGCTGGGTCCCT 1525
Query 76371 ATGAGACATTTGAGGGTT---------------------CTCCCGCGTC-CCAAGGG-GT 76407
|||| || | || ||| | ||| | ||| |||||| |
Sbjct 1526 ATGAAACTTATGCGGGCTCANTTATGAAACTTATGCGGGCTCGCCTGTCAGCAAGGGAAT 1585
Query 76408 GCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACG--ACTGGGATGTTCTC 76465
| |||| |||||||||| || | ||| | || | ||| | | |||| | ||
Sbjct 1586 TTTACAGTATGATATGTGGCAA-AAAACACCTA-CTGATCTATGGAATTGGGCGGAGCTG 1643
Query 76466 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAA 76523
||||| || | | || | |||| | ||||| | || ||||||||||| |
Sbjct 1644 AAGGAGAAAATTGCTAAACATGGCGTGCGTA--ATTCTTTGCTTATTGCACCAATGCCTA 1701
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
| |||||||| ||||||||| |||| |||||||||| ||||| || || || | || |
Sbjct 1702 CGGCCTCCACTGCACAAATCATGGGCAATAATGAATCTTTTGAGCCTTATACTTCTAATA 1761
Query 76584 TCTA 76587
||||
Sbjct 1762 TCTA 1765
>seq1845
Length=2059
Score = 150 bits (166), Expect = 2e-31
Identities = 302/445 (68%), Gaps = 2/445 (0%)
Strand=Plus/Plus
Query 14340 AGCGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATG 14399
||||||| || || ||||| ||| || | || ||| ||| | || ||| | |
Sbjct 1408 AGCGCTCCATACCCTCTATGGTGGACGGCTTTAAACCTGGTCAGCGTAAGGTGCTATTCA 1467
Query 14400 CTTGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCG 14459
|||||||| | ||| |||| ||||| |||||||||||||| || | | | || |
Sbjct 1468 CTTGCTTCAAACGTAATGACAAGCATGAAGTGAAGGTGGCACAATTGTCTGGTTCGGTGG 1527
Query 14460 CGGACAAGTCTGCGTACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGG 14519
| || |||||||| || || || |||||||| |||||| || |||||||| ||||
Sbjct 1528 CTGAAAAGTCTGCCTATCATCACGGTGAAGTGTCCTTACAAATGACTATTGTTAATTTGG 1587
Query 14520 CAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTA 14579
|| | ||| || || || || ||||| || | || || ||||||||||||| |
Sbjct 1588 CACAGAACTTTGTAGGCTCCAATAATATTAATCTGTTGGAGCCACGTGGTCAATTTGGCA 1647
Query 14580 CGCGTCTCATGGGTGGTAAGGATGCTTCTCAG-ACGAGGTACATTTTCACAAAACTTACC 14638
| ||| | | |||||||| ||||| | ||| || | || |||||||||||| | |
Sbjct 1648 CACGTTTAACTGGTGGTAAAGATGCAGC-CAGTGCGCGTTATATTTTCACAAAATTGTCG 1706
Query 14639 AAGGAGGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGAT 14698
||| |||| ||||| | | || | |||||| || | || | ||| | |||
Sbjct 1707 CCATTGGCACGCATGATCTATCACCCACAGGATGATCCCTTGCTGGAATACGAAGTTGAT 1766
Query 14699 GATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAAT 14758
|||| || |||||||| | | || || |||| | |||| ||||| || || |||
Sbjct 1767 GATGCACAGAAAGTTGAACCAAAATGGTATATACCAATTATACCCATGGTACTGGTCAAT 1826
Query 14759 GGAACCGAGGGTATCGGTACGGGTT 14783
|| | || || || || || ||||
Sbjct 1827 GGTGCAGACGGCATAGGCACTGGTT 1851
>seq24243
Length=2007
Score = 138 bits (152), Expect = 1e-27
Identities = 299/445 (67%), Gaps = 2/445 (0%)
Strand=Plus/Plus
Query 14340 AGCGCTCTATTGCCCATATGGCGGATGGTCTCAAGCCTTCACAGAGGAAAGTGATGTATG 14399
||||||| || || |||| ||| || | || ||| ||| | || ||| | |
Sbjct 1111 AGCGCTCCATACCCTCCATGGTGGACGGCTTTAAACCTGGCCAGCGTAAGGTGCTATTCA 1170
Query 14400 CTTGCTTCCATAAGAATCTCAAGGATGAAATGAAGGTGGCACAACTGGCGGCATATGTCG 14459
|||||||| | ||| |||| ||||| |||| ||||||||| || | | | || |
Sbjct 1171 CTTGCTTCAAACGTAATGACAAGCATGAAGTGAAAGTGGCACAATTGTCTGGTTCGGTGG 1230
Query 14460 CGGACAAGTCTGCGTACCACCATGGTGAAGTATCCTTAGCGGACACGATTGTTAAGTTGG 14519
| || ||||| || || || || |||||||| |||||| || |||||||| ||||
Sbjct 1231 CTGAAAAGTCCGCCTATCATCACGGTGAAGTGTCCTTACAAATGACTATTGTTAATTTGG 1290
Query 14520 CAAACGACTACACGGGTTCAAACAACATTAACCTTCTTGAACCGTGTGGTCAATTTGGTA 14579
|| | ||| || || || || ||||| || | || || ||||||||||||| |
Sbjct 1291 CACAGAACTTTGTAGGCTCCAATAATATTAATCTGTTGGAGCCACGTGGTCAATTTGGCA 1350
Query 14580 CGCGTCTCATGGGTGGTAAGGATGCTTCTCAG-ACGAGGTACATTTTCACAAAACTTACC 14638
| ||| | | |||||||| ||||| | ||| || | || |||||||||||| | |
Sbjct 1351 CACGTTTAACTGGTGGTAAAGATGCAGC-CAGTGCGCGTTATATTTTCACAAAATTGTCG 1409
Query 14639 AAGGAGGCTCGCAAGATCTTTGATCCTCGGGATGACCCGATCCTCAACTACTTGGACGAT 14698
||| |||| ||||| | | || | |||||| || | || | ||| | |||
Sbjct 1410 CCATTGGCACGCATGATCTATCACCCACAGGATGATCCCTTGCTGGAATACGAAGTTGAT 1469
Query 14699 GATGGACGCTCCATTGAACCAGACTTTTACATGCCAACTTTACCAATGGTTCTCGTGAAT 14758
|||| || |||||||| | | || || |||| | |||| ||||| || || |||
Sbjct 1470 GATGCACAGAAAGTTGAACCAAAATGGTATATACCAATTATACCCATGGTACTGGTCAAT 1529
Query 14759 GGAACCGAGGGTATCGGTACGGGTT 14783
|| | || || || || || ||||
Sbjct 1530 GGTGCAGACGGCATAGGCACTGGTT 1554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596338063881120
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