Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_020873.1
Length=158621
Score E
Sequences producing significant alignments: (Bits) Value
seq9887 86.0 6e-12
seq2410 84.2 2e-11
>seq9887
Length=3258
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/187 (73%), Gaps = 15/187 (8%)
Strand=Plus/Minus
Query 157596 ACGGGACTCGAACCCGTTTC-TCTTGCGTGACAGGCAAGTGTGTTAACCCA-TATACTAA 157653
|||||| | ||||||| | |||| ||||||||||||| || ||||| | | ||||
Sbjct 3127 ACGGGATTTGAACCCGCGACCTCTTACGTGACAGGCAAGCGTTCTAACCAACTGAACTA- 3069
Query 157654 CAAGCCATTAATGGTGCCGACTGTAGGAATCGAACCCACGACCTACTGCT-TACAAGGCA 157712
| ||| |||||| || ||||| |||||||| ||||| ||| | | ||| ||
Sbjct 3068 ----CTATTCTTGGTGCAAACAGTAGGGATCGAACCTACGACACTCTGATCTTCAA-TCA 3014
Query 157713 GTCGCTCTAACCAACTGAGCT--AAGAAGGCAA-ATTGGAGGGACATGTCGGAATCGAAC 157769
| ||||| |||||||||||| ||||| ||| |||| | | |||||||| ||||||
Sbjct 3013 GATGCTCT-ACCAACTGAGCTACAAGAA--CAATTTTGGGGTAATATGTCGGACTCGAAC 2957
Query 157770 CGACCTC 157776
|||| ||
Sbjct 2956 CGACATC 2950
>seq2410
Length=3205
Score = 84.2 bits (92), Expect = 2e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 157677 TAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCTAAG 157736
||||| ||||||| | ||||||||||||| |||||||| |||||| |||||||||||||
Sbjct 937 TAGGATTCGAACCTATGACCTACTGCTTAGAAGGCAGTTGCTCTATCCAACTGAGCTAAC 878
Query 157737 AAGGCA 157742
|| |||
Sbjct 877 AACGCA 872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507262248741240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |