Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_020879.1 Length=161978 Score E Sequences producing significant alignments: (Bits) Value seq2789 109 6e-19 >seq2789 Length=15484 Score = 109 bits (120), Expect = 6e-19 Identities = 222/330 (67%), Gaps = 0/330 (0%) Strand=Plus/Plus Query 37675 AATGTCAGGGTACATTCGCTTGGCTGAACATTCCAGAGCAAGGTGTTTAATTTCATAGTT 37734 ||| ||||| |||||||| | | ||||||||| || || || ||||| || ||||| || Sbjct 3131 AATATCAGGATACATTCGTTGTGTTGAACATTCAAGCGCCAGTTGTTTTATATCATAATT 3190 Query 37735 TGGATCTCCAGGATTTAAGTTTATACCAGCTTCCATGAACATAACGAGTTTTGGAAATAC 37794 ||||| | | | || ||| | || ||| ||| | ||| |||||||||||||| Sbjct 3191 AGGATCGCTATTAATTCTATTTGTCCCTTCTTTTATGGCAAAAACAAGTTTTGGAAATAC 3250 Query 37795 TGGCGTGATGCCATTCTTTCCAAGACCCTTGATTCGTACTTTCAAAATAGCTTTTTGAAT 37854 || ||| | ||| ||||| | || || |||| | | || || | ||||||||| Sbjct 3251 TGCCGTTTTTTTATTTTTTCCTAACCCATTTATTCTGTTTCTTAATATTGATTTTTGAAT 3310 Query 37855 TTCTTTTTCGAACCAGTTAGTTCCCATCCCAAATGTAATTGTCACGAACGGTGTTTGGCC 37914 | | |||| || |||| | ||||| || || || || || ||||| || Sbjct 3311 TAATCTTTCCTCTTTTGTAATTCCAAGTCCAAAACCAAAAGTAACAAATGGGGTTTGTCC 3370 Query 37915 ATTTGTGGTAAACATCGTGTTGACTTCATATTCGAAAGCTTGCATACCGTCATAGATTTC 37974 ||||| |||| || || || | ||||||||| || |||| | | | ||| | ||| Sbjct 3371 ATTTGCGGTATGCAAAGTATTAATTTCATATTCTAATCCTTGAAAAGCATCAAAACATTC 3430 Query 37975 TTTAGCAGTCATCTCATATGCATATTTTTC 38004 ||| || | | |||| ||||||| || Sbjct 3431 TTTTTCAATTTTTTCATTAACATATTTATC 3460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518000479481520