Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq1262 91.5 2e-13 >seq1262 Length=72559 Score = 91.5 bits (100), Expect = 2e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 93593 TTTATAACGTTCTTTTCCAGTGCCGTTGCATGAACTGCATTTTGGCGATCCGTGGTTATC 93652 |||||| |||||||||||||| || || || ||||| |||||||| || | || | || Sbjct 20 TTTATATCGTTCTTTTCCAGTTCCATTACAAGAACTACATTTTGGTGAACGATGACTGTC 79 Query 93653 ATATCGCCCCGAACCATTACATGCAACACATTTCCGTAATTTCCAGCCATACACGAACCG 93712 ||| | || ||||| ||||| ||||||||||| | ||||| | ||||| | || Sbjct 80 ATACCTTCCAGAACCGTTACAAGCAACACATTTTCTCAATTTAAATCCATATTCAAATTT 139 Query 93713 CATGTAATAATCGGTTCGTGCTGCCTTGCGCTCATGGAAGTTCATACTTT 93762 | |||| | |||| | || | || | ||||| || ||||| |||| Sbjct 140 AAAATAATGGTTCGTTCTTTCTTCTTTTCTTTCATGAAAATTCATGCTTT 189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563579582793480