Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_021782.1
Length=72098
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 87.8 8e-13
seq4088 86.0 3e-12
>seq1262
Length=72559
Score = 87.8 bits (96), Expect = 8e-13
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 63112 ATGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTC 63171
|||||| ||| ||||||||||||||||||||||||||||| ||||| | ||| || ||||
Sbjct 64750 ATGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGCCTTATCGGTGTGCGGGTTC 64691
Query 63172 GAGTCTCG 63179
||||| ||
Sbjct 64690 GAGTCCCG 64683
>seq4088
Length=5036
Score = 86.0 bits (94), Expect = 3e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 63172
||||| ||| ||||||||||||||||||||||||||||| ||||| | ||| || |||||
Sbjct 4421 TGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGCCTTATCGGTGTGCGGGTTCG 4480
Query 63173 AGTCTCG 63179
|||| ||
Sbjct 4481 AGTCCCG 4487
Score = 86.0 bits (94), Expect = 3e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 63172
||||| ||| ||||||||||||||||||||||||||||| ||||| | ||| || |||||
Sbjct 4969 TGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGCCTTATCGGTGTGCGGGTTCG 5028
Query 63173 AGTCTCG 63179
|||| ||
Sbjct 5029 AGTCCCG 5035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230501542964251
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |