Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq21755 93.3 5e-13
>seq21755
Length=2067
Score = 93.3 bits (102), Expect = 5e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165
|||| ||||| || || || || | ||||| ||| || | || || || ||
Sbjct 1719 AGAAACGCACTGATGATATATCATCTTGGGATGCGGATTTCCTGAAGGTTGATCAAGGCA 1660
Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225
| |||||||||||||| | || || || ||| | || || ||| || |||||| ||
Sbjct 1659 CACTCTTTGAGTTGATTTTGGCTGCTAATTACTTGGATATTAAGGGCCTACTCGATGTTA 1600
Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285
||||| |||| || |||||||| || ||||| |||| ||||| || |||||||| |
Sbjct 1599 CTTGCAAAACTGTTGCAAACATGATTAAAGGCAAAACGCCAGAGGAAATACGCAAGACTT 1540
Query 1592286 TTAACATCAAG 1592296
| || ||||||
Sbjct 1539 TCAATATCAAG 1529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6104591173657533
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |