Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq21755 93.3 5e-13 >seq21755 Length=2067 Score = 93.3 bits (102), Expect = 5e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||| ||||| || || || || | ||||| ||| || | || || || || Sbjct 1719 AGAAACGCACTGATGATATATCATCTTGGGATGCGGATTTCCTGAAGGTTGATCAAGGCA 1660 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | |||||||||||||| | || || || ||| | || || ||| || |||||| || Sbjct 1659 CACTCTTTGAGTTGATTTTGGCTGCTAATTACTTGGATATTAAGGGCCTACTCGATGTTA 1600 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 ||||| |||| || |||||||| || ||||| |||| ||||| || |||||||| | Sbjct 1599 CTTGCAAAACTGTTGCAAACATGATTAAAGGCAAAACGCCAGAGGAAATACGCAAGACTT 1540 Query 1592286 TTAACATCAAG 1592296 | || |||||| Sbjct 1539 TCAATATCAAG 1529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104591173657533