Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq2021 338 6e-88
seq4853 264 1e-65
>seq2021
Length=2943
Score = 338 bits (374), Expect = 6e-88
Identities = 980/1495 (66%), Gaps = 60/1495 (4%)
Strand=Plus/Minus
Query 138156 ATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCCGT 138215
||| |||||||| | ||| |||| || ||||| ||||| | || ||||||||| || ||
Sbjct 2150 ATCCACAGTAAATTGTATAGCATTGGCAGCTGGCTTCGTGCGCAAATAATACATACCGGT 2091
Query 138216 TTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGGTTT 138275
|| || || || ||| |||| | ||||| || || ||| | ||| |||| |
Sbjct 2090 CTTCAAGCCTGCTTTCCAACCGTAGAAATGTATGGATGTCAGTTTACCATAATTCGGCTC 2031
Query 138276 CGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGCCAT 138335
|||| | |||||||||||||||||| ||||| || ||||| || |||||| |||||
Sbjct 2030 AGCCACATGTATGTTAAACGATTGACTTTGATCTATAAAAGCACCACGATCAGCTGCCAT 1971
Query 138336 GTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG 138395
||||| | | ||| |||||||| || |||||||| | ||||| | ||| |
Sbjct 1970 TTTAATAGACGTCTTAACAGAAATCTCCCAAACTGTCTTGTACAAGTCACGCACATGCTG 1911
Query 138396 CGGTATTGTTGCAATATTTTGAAT-GCTCC-CGTTGGCCGCAATGATGCGATTTCTCATG 138453
|||||| |||||||||| || | ||| |||| | | || || |||| ||||
Sbjct 1910 CGGTATACGCTCAATATTTTGTATGGATCCACGTT--CAGATATAATATCATTTTTCATA 1853
Query 138454 TCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGA 138513
||||| | | |||| | || | |||| || || || || || | |||||
Sbjct 1852 TCATCATCCCATAGATCAAGCTCGGTCAAATCACGTAGCAAATGATGATTCACCACCTGG 1793
Query 138514 AATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCG 138573
|||||||| | |||||| ||||| || || || || |||||||||| |||||
Sbjct 1792 AATTCACCAGACAATACACGACGTGTATAGATATTAGAAGTATAAGGCTCAAAAGATTCA 1733
Query 138574 TTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTC 138633
|| || |||| || || || |||| || || ||||| || | | | ||||||
Sbjct 1732 TTATTGCCCATGATTTGTGCAGTGGAGGCCGTAGGCATTGGTGCAATAAGCAAAGAATTA 1673
Query 138634 CGTAAACC--GTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAG 138691
|| | || || ||| ||| ||||| ||| || ||| | ||| | ||| |||
Sbjct 1672 CGCACGCCATGTTTAGC--AATTTTCTCCTTCAGCTCCGCCCAATTCCATAGATCAGTAG 1615
Query 138692 GTTTTTTGTTCCACATATCGTACTGTAACATTCC----CAAACTTGCGGGACTGC----- 138742
|| |||| | ||||||||| |||||||| ||||| | || ||| | | ||
Sbjct 1614 GTGTTTTTTGCCACATATCATACTGTAAAATTCCCTTGCTGACAGGCGAGCCCGCATAAG 1555
Query 138743 CTTCGTA--------CGAA------TCGTATACACCAAACTCTTGCGCCAACTCGTTGCT 138788
||| || || | || || ||| | || | |||||||| |||
Sbjct 1554 TTTCATAANTGAGCCCGCATAAGTTTCATAGGGACCCAGCTTCTCAGCCAACTCACAGCT 1495
Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGC---AATCGGGC 138845
|| || | |||||||| ||||| ||||| || || ||||| ||| ||| ||
Sbjct 1494 GGCTTCCAAGGCACCATAATAAATCGTTTCAAATATTTGTTGATTTAGCTTAAAT---GC 1438
Query 138846 CTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCC 138905
|| | || || || || || | | | || || || || | ||||| |||||
Sbjct 1437 TTCCTCACTTTCATATGGATAACGCATGAGTATTAATGCATCTGCGAATCCTTGTACGCC 1378
Query 138906 CACTCCGACAGGGCGATGGCGCAGATTTG-ACGCTTTTGCGGCTTCG--ATAGGATAATA 138962
| || | || ||||| |||| ||||| |||||| | || || | || || ||
Sbjct 1377 AATACCTATGGGACGATGACGCATATTTGAACGCTT---GGCCTCCGGCAGCGGGTAGTA 1321
Query 138963 GTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTT-AATC 139021
|| | || ||||||||||| ||||| || || | |||| | | |||| | |
Sbjct 1320 ATTGATGTCTATGATTTTGTTCAAATTACGTGTTACAATTTTAG-CAACTTCTTTGAGTT 1262
Query 139022 GTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAA 139081
|| |||||| || || ||||| | | || |||||| | |||| ||
Sbjct 1261 TTTTAAAATCATAAGT------CTTGTC-TGG-----GTTGACAAACATATTGAGTGCAA 1214
Query 139082 TCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCAC 139141
| ||||||| || || || || | ||| || || | ||||| |||||||| | |
Sbjct 1213 TTGAGGCTAAATTACAAACAGCAATTTCATCCGGTGCCGAATATTCTACAATTTCAGTGC 1154
Query 139142 ACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCAT 139201
| ||||| || |||||||| || |||| ||| |||||||| || || || ||||||||||
Sbjct 1153 ATAAATTGCTGCACTTGATAGTGCCTAGATTCTGTTGATTACTCTTGCGATTACAAGCAT 1094
Query 139202 CTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACA 139261
| || || |||||||| || |||||||||||||| || | |||||||||| |||
Sbjct 1093 CCTTATAGAGCATATATGGAGTGCCAGTTTCCACCTGAGCCTCTATAATGGCAAACCACA 1034
Query 139262 AGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTT 139321
|| ||||| | || | | | | || ||||| || || || || ||||
Sbjct 1033 AGGTTTGAGCTTTAACAGTGCGATTGGCACGACCTTCACGCTCATATTTCTCATAAAGTT 974
Query 139322 CGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCG 139381
|||||| |||||| | | ||| || || | ||||||| || |||||||| |
Sbjct 973 GCTCGAATTCTTCACCCCAAACTTCATGTAGTCCGGGGCACTTGTGTGGGCACATGAGTG 914
Query 139382 ACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACA 139441
|||| |||| | |||| || || ||||||| | || || ||||| | ||| | |
Sbjct 913 ACCAATCGCCATCTGCCTCCACACGTTTCATGAATAAGTCGGGTATCCATAGAGCATAAA 854
Query 139442 GCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAA 139501
||||| || || | |||||| || | || |||| | | || ||||
Sbjct 853 ATAAATCTCGTGCACGATACTCTTCCTTGCCAGTATTTTTCTTCAAATCCAAAAACTCAA 794
Query 139502 AAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTGCCACCT- 139560
| | || | |||||| ||||| | ||||||||| | |||||| |||||||| |||
Sbjct 793 ATATATCCGAGTGCCAGGGTTCTAAATAGATGGCGAAGGCGCCTGGACGTTTGCCGCCTC 734
Query 139561 --TGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACC 139613
||||| |||| || | | |||||||| || |||| ||| ||| | | |||
Sbjct 733 CCTGATCCACGTAGCGCGCCACGTTATTGAACACACGCAGCATAGGCACTAAACC 679
>seq4853
Length=2014
Score = 264 bits (292), Expect = 1e-65
Identities = 898/1383 (65%), Gaps = 47/1383 (3%)
Strand=Plus/Plus
Query 138658 TCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGT 138717
||||| ||| || ||| | ||| | ||| ||||| |||| | ||||||||| ||||||
Sbjct 87 TCCTTCAGCTCCGCCCAATTCCATAGATCAGTAGGTGTTTTTTGCCACATATCATACTGT 146
Query 138718 AACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCC 138777
|| |||||| || | || ||| | || | || || ||| | || | |||
Sbjct 147 AAAATTCCCTTGCTGACAGGTGAGCCCGCATAAGTTTCATAGGGACCCAGCTTCTCAGCC 206
Query 138778 AACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGC 138837
||||| ||| || || | |||||||| ||||| ||||| || || ||||| |||
Sbjct 207 AACTCACAGCTGGCTTCCAAGGCACCATAATAAATCGTTTCAAATATTTGTTGATTTAGC 266
Query 138838 ---AATCGGGCCTCGGCGCTCTCGTACGGCATGCG---GAGCATCGTGAACGCGTCGGCC 138891
||| || || | || || || || || ||| ||| || || || ||
Sbjct 267 TTAAAT---GCTTCCTCACTTTCATATGGATAACGCATGAGTATC---AATGCATCTGCG 320
Query 138892 AGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGA-CGCTTTTGCGGCTTC 138950
| ||||| || || | || | || ||||| |||| |||||| ||||| | || |
Sbjct 321 AATCCTTGTACTCCAATACCTATGGGACGATGACGCATATTTGAACGCTTG---GCCTCC 377
Query 138951 GATAG--GATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTC 139008
| || | || || || | || ||||||||||| ||||| || || | |||| |
Sbjct 378 GGCAGCGGGTAGTAATTGATGTCTATGATTTTGTTCAAATTACGTGTTACAATTTTAG-C 436
Query 139009 GTATGCTTTAA-TCGTTCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAA 139067
| |||| | | || |||||| || || ||||| | | || ||||||
Sbjct 437 AACTTCTTTGAGTTTTTTAAAATCATAAGTC------TTGTC-TGG-----GTTGACAAA 484
Query 139068 TTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTC 139127
| |||| ||| ||||||| || || || || | ||| || || | |||||
Sbjct 485 CATATTGAGTGCAATTGAGGCTAAATTACAAACAGCAATTTCATCCGGTGCCGAATATTC 544
Query 139128 GACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTT 139187
|||||||| | || ||||| || |||||||| || |||| ||| |||||||| || ||
Sbjct 545 TACAATTTCAGTGCATAAATTGCTGCACTTGATAGTGCCTAGATTCTGTTGATTACTCTT 604
Query 139188 TCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTAT 139247
|| ||||||||||| || || |||||||| || ||||||||||||||||| | ||||||
Sbjct 605 GCGATTACAAGCATCCTTATAGAGCATATATGGAGTGCCAGTTTCCACTTGAGCCTCTAT 664
Query 139248 AATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTA 139307
|||| ||||| ||||| | || | | | | || ||||| ||
Sbjct 665 AATGGCAAACCACAAGGTTTGAGCTTTAACAGTGCGATTGGCACGACCTTCACGCTCATA 724
Query 139308 CTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTC 139367
|| || || |||| |||||| |||||| | | ||| || || | |||||||
Sbjct 725 TTTCTCATAAAGTTGCTCGAATTCTTCACCCCAAACTTCATGTAGTCCGGGGCACTTGTG 784
Query 139368 AGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAAT 139427
|| |||||||| ||||| |||| | |||| || || ||||||||| || || ||
Sbjct 785 TGGGCACATGAGTGACCAATCGCCATCTGCCTCCACACGTTTCATGAACAAGTCGGGTAT 844
Query 139428 CCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCAT 139487
||||| ||| | | ||||| || || | |||||| || | || ||||
Sbjct 845 CCACAGAGCATAGAATAAATCTCGTGCACGATACTCTTCCTTGCCAGTATTTTTCTTCAA 904
Query 139488 GTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTT 139547
| | || ||||| | || | |||||| ||||||| ||||||||| | || |||
Sbjct 905 ATCCAAAAACTCAAATATATCCGAGTGCCAGGGTTCCAAATAGATGGCGAAGGCACCTGG 964
Query 139548 CCGTTTGCCACCT---TGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGG 139604
|||||||| ||| ||||| |||| || | | |||||||| || |||| ||| ||
Sbjct 965 ACGTTTGCCGCCTCCCTGATCCACGTAGCGCGCCACGTTATTGAACACACGCAGCATAGG 1024
Query 139605 CTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGAC 139661
| | | ||| | | || || || |||| | ||| | | ||| || || |
Sbjct 1025 CACTAAACCATTAGAGGTGCCATTCGTGCCAGCAATGCCCGTGCCTTTG---GCGCGTAT 1081
Query 139662 GTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAA 139721
| ||| ||||| | ||| || ||||| | | ||||| || | |||| | ||
Sbjct 1082 GCAATGCACATTCAGGCCAATGCCGCCTGCGGACTTGGAGATCATGGCGCATTGCTCTAC 1141
Query 139722 TGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAG 139781
| || | | ||||| ||| ||| | ||| |||| ||| || || || || ||
Sbjct 1142 GGACTTGAAAATACCCTCGATGGAGTCAGCAACCATAGTGAGCAGGAAACAGGAGGACAG 1201
Query 139782 TTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTT 139841
||| || || | ||| | || || || || || ||| ||||| || || | |
Sbjct 1202 TTGTGGGCGTCTTGTGGCTGCAGCGAATAGCGTGGGAGAGGCGTGAGTAAAATAGCGCTC 1261
Query 139842 CGACATCAATTCGTACGTTTCGATGGCGCTCA-CAATATCCCTTCCGTGGATACCGACAG 139900
|| | || | ||| ||||| ||||| | || | |||||| ||||| || || ||||
Sbjct 1262 TGATAGTAAATTGTAGGTTTCTATGGC-CGCATCGATATCCTCGCCGTGTATGCCCACAG 1320
Query 139901 AGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGAT 139960
|| |||||||| | |||||| || ||| | | | || | |||||| | ||
Sbjct 1321 CCACACGCATCAGTAGATGTTGAGGACGCTCGACAATTTCCCCATTGATTTTCAATAAAT 1380
Query 139961 A--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCGAGCGCATAATT 140018
| | ||| || || |||||| | || ||||| ||||| || ||| | ||||| |
Sbjct 1381 AGGAACGT--TCGAGTGTCTTGAATCCGAAGTAATTATAGCCAAAGTCGCGATCATAAAT 1438
Query 140019 AAT 140021
|||
Sbjct 1439 AAT 1441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449722989117720
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