Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq13293 132 4e-26 seq4718 123 2e-23 seq14521 120 3e-22 >seq13293 Length=1349 Score = 132 bits (146), Expect = 4e-26 Identities = 159/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||||||| | || ||||| ||||| || || || || || ||||| ||||| || | Sbjct 214 TTGTAATCAAATTGAGTTTGAGCGCCAAGTTCACAACCAAAATACTTGGTCGGATAGGTA 155 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || |||||||| | || | || || || ||||||||| ||||| ||||||||||| Sbjct 154 GCTGGACGTCCTAAAGCTCTAGCTATATCAATCATGTTGACTATGACGGTCTTGATGCCA 95 Query 34552 TTGCCCTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 |||||||| ||||| ||||| || ||||||| | ||||||||||||| ||||| | | Sbjct 94 TTGCCCTTGCCTTCCACCTTTGCTAGCAGATGGG--GCATTTTGTAGCGATAGAAAGGAT 37 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | |||| || ||||| || | || ||||| Sbjct 36 CGCTTACATAACGATTAACATTTAGAGAACCCAT 3 >seq4718 Length=1987 Score = 123 bits (136), Expect = 2e-23 Identities = 157/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||||||| | || ||||| ||||| || || || || |||||||| ||||| || | Sbjct 231 TTGTAATCAAATTGAGTTTGAGCGCCAAGTTCACAACCAAAGTACTTGGTCGGATAGGTA 290 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || |||||||| | || | || || || ||||||||| ||||| ||||||||||| Sbjct 291 GCTGGACGTCCTAAAGCTCTAGCTATATCAATCATGTTGACTATGACGGTCTTGATGCCA 350 Query 34552 TTGCCCTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 |||||||| || || ||||| || | |||| | ||||| |||||||| ||||| | | Sbjct 351 TTGCCCTTGCCCTCCACCTTTGCTAGTAGAT--GAGGCATCTTGTAGCGATAGAAAGGAT 408 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | |||| || ||||| || | || ||||| Sbjct 409 CGCTGACATAACGATTAACATTTAGAGAACCCAT 442 >seq14521 Length=2880 Score = 120 bits (132), Expect = 3e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||||||| | || ||||| ||||| || || || || || ||||| ||||| || | Sbjct 1241 TTGTAATCAAATTGAGTTTGAGCGCCAAGTTCACAACCAAAATACTTGGTCGGATAGGTA 1182 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 || |||||||| | || | || || || ||||||||| ||||| ||||||||||| Sbjct 1181 GCTGGACGTCCTAAAGCTCTAGCTATATCAATCATGTTGACAATGACGGTCTTGATGCCA 1122 Query 34552 TTGCCCTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 || ||||| || || ||||| || | ||||| | ||||||||||||| ||||| | | Sbjct 1121 TTACCCTTGCCCTCCACCTTTGCTAGTAGATGAG--GCATTTTGTAGCGATAGAAAGGAT 1064 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | |||| || ||||| || | || ||||| Sbjct 1063 CGCTGACATAACGATTAACATTTAGAGAACCCAT 1030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412685376739157