Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_022343.1
Length=159991
Score E
Sequences producing significant alignments: (Bits) Value
seq4032 93.3 4e-14
seq1262 87.8 2e-12
>seq4032
Length=2654
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/100 (81%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 84403 GCAGGACTTGAACCTGCGACATATGGATTAACAGTCCACCGTTCTACCGACTGAACTACA 84462
||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 1362 GCAAGACTCGAACTTGCGACATATGGATTAACAGTCCACCGTTCTACCAACTGAACTAAA 1303
Query 84463 CCATCTCAATTCTTTGGCATCCCCTCCAGGACTCGAACCT 84502
| || || |||||| | | | |||||| ||||||
Sbjct 1302 --AGGTCTTTTTTTTGGCGACTCATGTAGGACTTGAACCT 1265
Score = 93.3 bits (102), Expect = 4e-14
Identities = 81/100 (81%), Gaps = 2/100 (2%)
Strand=Plus/Minus
Query 84403 GCAGGACTTGAACCTGCGACATATGGATTAACAGTCCACCGTTCTACCGACTGAACTACA 84462
||| |||| |||| |||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct 1625 GCAAGACTCGAACTTGCGACATATGGATTAACAGTCCACCGTTCTACCAACTGAACTAAA 1566
Query 84463 CCATCTCAATTCTTTGGCATCCCCTCCAGGACTCGAACCT 84502
| || || |||||| | | | |||||| ||||||
Sbjct 1565 --AGGTCTTTTTTTTGGCGACTCATGTAGGACTTGAACCT 1528
>seq1262
Length=72559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 54/58 (93%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 84403 GCAGGACTTGAACCTGCGACATATGGATTAACAGTCCACCGTTCTACCGACTGAACTA 84460
|| ||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 60754 GCTGGACTCGAACCAGCGACATATGGATTAACAGTCCACCGTTCTACCAACTGAACTA 60811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511644547256040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |