Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq18712 109 3e-19 >seq18712 Length=4002 Score = 109 bits (120), Expect = 3e-19 Identities = 134/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 37979 TGTCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGC 38038 ||||||||||||||| | || || ||| | |||||||||||||| || ||||| | | | Sbjct 3329 TGTCAGTTATATCAAAGAAGCGCAGATATGTTCTTAGGTGTTCCTTTCAATATAGTATTC 3270 Query 38039 TATGCGTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTC 38098 ||| | |||| || ||||| |||| |||||| ||| ||| ||| |||||||| | Sbjct 3269 TATTCAATGCTAACTCATATTTTAGCCGCAGAACTTGGTATAGGAGTAGGTGAATTCATA 3210 Query 38099 TGGACTGGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATTA 38158 ||| ||||||| ||| | || |||||| |||||||||| | | |||||| Sbjct 3209 TGGGTAGGTGGTGATTGTCATATTTATGATAATCATATTGAGCAAGCATTAGAGCAATTA 3150 Query 38159 AGT 38161 ||| Sbjct 3149 AGT 3147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248715448037017