Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_023590.1 Length=43050 Score E Sequences producing significant alignments: (Bits) Value seq30549 96.9 1e-15 >seq30549 Length=45900 Score = 96.9 bits (106), Expect = 1e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 36945 CCAGTGAACCAACCTTCCATCATGCCAGTAATTAGGATTTTTACAGCCCATTCTTTAATC 37004 || || ||||||||||| ||||||| ||| | |||||| ||||| |||||| || Sbjct 29764 CCTGTAAACCAACCTTCTTTCATGCCGACAATCATGATTTTAACAGCATGTTCTTTTTTC 29705 Query 37005 ATTACGTCGTCGGGATTCTTCGCAAAGTCATGCCCTAGTTTCAAGCCTGCTTTGACATAA 37064 || || |||||||||| | | | |||| || ||||| ||||||| | ||| Sbjct 29704 ATAACTAAATCGGGATTCTGAGTATAATCATAACCCAGTTTGTTTGATGCTTTGTCGTAA 29645 Query 37065 TTATCCAACCATGTAAGTTGAACGTAACCGCGCCCATAATA 37105 ||| || |||| ||||| ||||| ||||| || |||||||| Sbjct 29644 TTAGCCCACCAAGTAAGCTGAACATAACCACGACCATAATA 29604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137587651775656