Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_024122.1
Length=162910
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 105 7e-18
seq2410 104 2e-17
>seq1262
Length=72559
Score = 105 bits (116), Expect = 7e-18
Identities = 75/85 (88%), Gaps = 1/85 (1%)
Strand=Plus/Plus
Query 83199 TTATTTAGTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTG 83258
||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||||| ||
Sbjct 63810 TTATTTATTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTG 63869
Query 83259 CTCTAACC-ACTGAGCTACGGGGCC 83282
|||||||| ||||||||| ||||||
Sbjct 63870 CTCTAACCAACTGAGCTAAGGGGCC 63894
Score = 84.2 bits (92), Expect = 2e-11
Identities = 59/66 (89%), Gaps = 1/66 (2%)
Strand=Plus/Plus
Query 83218 GCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC-ACTGAGCTAC 83276
||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||||
Sbjct 64414 GCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACCAACTGAGCTAA 64473
Query 83277 GGGGCC 83282
|| |||
Sbjct 64474 GGAGCC 64479
>seq2410
Length=3205
Score = 104 bits (114), Expect = 2e-17
Identities = 74/84 (88%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 83199 TTATTTAGTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTG 83258
||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||||| ||
Sbjct 1034 TTATTTATTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTTTG 975
Query 83259 CTCTAACC-ACTGAGCTACGGGGC 83281
|||||||| ||||||||| |||||
Sbjct 974 CTCTAACCAACTGAGCTAAGGGGC 951
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 83218 GCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC-ACTGAGCTAC 83276
||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||||
Sbjct 1846 GCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACCAACTGAGCTAA 1787
Query 83277 GGGGCCAAAATTT 83289
|||| | || |||
Sbjct 1786 GGGGGCTAACTTT 1774
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 83207 TGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC 83266
||||| | | ||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 2378 TGGTGCCTCCTGCTGGACTTGAACCAGCGACCTGACGATTATGAGTCGTATGCTCTAACC 2319
Query 83267 -ACTGAGCTACGGGGCCA 83283
||||||||| |||| ||
Sbjct 2318 AACTGAGCTAAGGGGGCA 2301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 520981721974800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |