Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq9465 185 2e-41
>seq9465
Length=7312
Score = 185 bits (204), Expect = 2e-41
Identities = 310/446 (70%), Gaps = 2/446 (0%)
Strand=Plus/Plus
Query 198181 GAGAACTGTCGGATAATTTTTGTTACTATAATAAACATTACGATAGCGTACAGTCTACTC 198240
|||| |||| ||||||||||||| || ||| ||||||| |||||| | || | |
Sbjct 6194 GAGAGTTGTCTGATAATTTTTGTTTTTACAATGAACATTATGATAGCATCAAGGGTGCAG 6253
Query 198241 ACGCATGGGCTAGAAGAACATTAGAAGATCACATTAATGATCCTAGAAAGTATATCTATT 198300
|| ||||| || ||| |||| ||||| | || ||| | | | | | ||
Sbjct 6254 CTGCTTGGGCACAAACAACGCTAGATGATCATAAGAAGGATAAACGCACTTCTGTGTACA 6313
Query 198301 CTATTAAACAACTCGAAAAGGCGGAAACACATGACCCTCTATGGAATGCATCGCAAATAC 198360
| | | || | || | ||| ||||| || | ||||||||||| | |||||||
Sbjct 6314 GTTTGCAGGAATTTGAGGAAGCGCGCACACACGAGGATTTATGGAATGCAGCACAAATAC 6373
Query 198361 AGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATGTACTGGGCTAAAAAGATAC 198420
|| ||| ||| || || ||||||||| ||||| | | ||||| ||||||||||| ||||
Sbjct 6374 AGTTGAAAAGGGAGGGTAAAATGCATGGTTTTATGCGCATGTATTGGGCTAAAAAAATAC 6433
Query 198421 TTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTATAGT-ATCTATCTAAACAATAAG 198479
| |||||| | || || || | |||||| | || | |||||| | || | |||
Sbjct 6434 TAGAATGGTCGGAAAGTCCAGAGAAAGCTTTG-GAAATTGCCATCTATTTGAATGACAAG 6492
Query 198480 TACGAACTAGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGA 198539
|| | || ||||||| |||||||| || | || |||||||||||||| ||||| ||
Sbjct 6493 TATGCGCTGGACGGCAGTGATCCTAATGGTTTTGTTGGTTGTATGTGGTCGATTTGTGGC 6552
Query 198540 TTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGGGAAGATAAGATATATGAATTAT 198599
||||||||| || ||| |||||| | | ||||| || ||| | || ||||| |||
Sbjct 6553 ATACATGATCAAGGATGGGGTGAAAGAGCAGTTTTTGGTAAAATACGTTACATGAACTAT 6612
Query 198600 GAGGGTTCTAAGAAAAAATTTGATGT 198625
| || | ||| |||||||||||
Sbjct 6613 GCTGGCTGTAAACGCAAATTTGATGT 6638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981436614105611
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |