Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq9465 168 1e-36
>seq9465
Length=7312
Score = 168 bits (186), Expect = 1e-36
Identities = 219/300 (73%), Gaps = 2/300 (1%)
Strand=Plus/Plus
Query 183010 ACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCAT 183069
||||| || | ||||||||||| ||||||||||| ||| || || || |||||||||
Sbjct 6340 ACACACGAGGATTTATGGAATGCAGCACAAATACAGTTGAAAAGGGAGGGTAAAATGCAT 6399
Query 183070 AGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGAT 183129
||||| | || ||||| ||||||||||| ||||| |||||| | || ||| || |
Sbjct 6400 GGTTTTATGCGCATGTATTGGGCTAAAAAAATACTAGAATGGTCGGAAAGTCCAGAGAAA 6459
Query 183130 GCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAA 183188
|||||| | || | |||||| |||| | ||||| | || ||||| | ||||||||
Sbjct 6460 GCTTTG-GAAATTGCCATCTATTTGAATGACAAGTATGCGCTGGACGGCAGTGATCCTAA 6518
Query 183189 CGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAG 183248
|| | || |||||||||||||| ||||| || |||| ||| || ||| |||||
Sbjct 6519 TGGTTTTGTTGGTTGTATGTGGTCGATTTGTGGCATACATGATCAAGGATGGGGTGAAAG 6578
Query 183249 ACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 183308
| | | ||||| || ||| | || ||||| |||| | | ||| |||||||||||
Sbjct 6579 AGCAGTTTTTGGTAAAATACGTTACATGAACTATGCTGGCTGTAAACGCAAATTTGATGT 6638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903060574820640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |