Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_024785.1 Length=44844 Score E Sequences producing significant alignments: (Bits) Value seq30549 89.7 1e-13 >seq30549 Length=45900 Score = 89.7 bits (98), Expect = 1e-13 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 37666 TCATTTAGTTC-GTATTGATTTTCGCAAACTATATAATCAACACCGAATATCTTTTTATT 37724 ||||||||||| ||| || | || |||| | ||||||| ||| |||| ||||||| Sbjct 4323 TCATTTAGTTCTGTAATGTTCTT-GCAAGGCAAATAATCACAACCAAATAAGTTTTTATG 4265 Query 37725 ATTCATAAAGTGGATTAATACATAATTTCCA-ACCTTCTCATGACTATCCCTTGTCAACC 37783 || |||||| || ||||| || |||||| | | ||| || | || |||| | || Sbjct 4264 ATCCATAAAATGTATTAACACGTAATTTTCGTATCTTGG-ATAAGAGTCTTTTGTTATCC 4206 Query 37784 ATATTCTTGACATTGCAAAATCAAATTTATGGTGAAATCCTTTCTTT 37830 ||||| | ||||||||||||||| ||||| || |||||||||| Sbjct 4205 ATATTAATTTCATTGCAAAATCAAACTTATGAAAAATTCCTTTCTTT 4159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143326335103228