Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_025414.1
Length=178171
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 113 5e-20
seq1262 87.8 2e-12
>seq2698
Length=11445
Score = 113 bits (124), Expect = 5e-20
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 51006 CCGACTGTTAAAGTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACC 51065
|| ||||| | ||||||||||||||| || |||| || || || || || |||||
Sbjct 5309 CCTACTGTAAGAGTTGAAGGTGGACAACATTTAAATGTAAACGTTCTTCGAAAAGAAACA 5368
Query 51066 CTGAAAGATGCTGTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGT 51125
|| ||||| || |||||||||| || ||||| |||||||| || | ||||||||
Sbjct 5369 CTTCTTGATGCAGTAGAACATCCTGAAAAATACCCGCAGTTAACAATTAGGGTTTCAGGA 5428
Query 51126 TATGCAGTTCGCTTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACC 51185
||||| ||| | ||||| | | || || |||||||| | || ||||| |||||||
Sbjct 5429 TATGCTGTTAGATTTAACTCTTTAACACCTGAACAACAACAAGATGTTATTACCAGAACT 5488
Query 51186 TTTAC 51190
|| ||
Sbjct 5489 TTCAC 5493
>seq1262
Length=72559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 95356 TTTATAACGTTCTTTTCCAGTGCCGTTGCATGAACTGCATTTTGGCGATCCGTGGTTATC 95415
|||||| |||||||||||||| || || || ||||| |||||||| || | || | ||
Sbjct 20 TTTATATCGTTCTTTTCCAGTTCCATTACAAGAACTACATTTTGGTGAACGATGACTGTC 79
Query 95416 ATATCGCCCAGACCCATTACATGCAACACATTTCCGTAATTTCCAGCCATA 95466
||| | ||||| || ||||| ||||||||||| | ||||| | |||||
Sbjct 80 ATACCTTCCAGAACCGTTACAAGCAACACATTTTCTCAATTTAAATCCATA 130
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569797968423240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |