Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq2789 91.5 2e-13 >seq2789 Length=15484 Score = 91.5 bits (100), Expect = 2e-13 Identities = 173/252 (69%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 35604 ACATACGGTGCTAACACCTGATCGATGTTTGCAATTGTGGTCCCGCCATATTGATGACTT 35663 ||||| || ||||| | |||||| || ||| || || || ||||| ||||||| Sbjct 3519 ACATAAGGGGCTAAAATAATATCGATATTGTTAATCGTTGTTCCACCATAAGTATGACTT 3578 Query 35664 GCCACCTGTGCGATAATTTGAGCGGTTACAGCACAAGCAACGCCGATTGATTTCGGACTT 35723 || || || || || |||||||| |||| ||| || || ||||| ||| || Sbjct 3579 GCGACTTGCGCTATTATTTGAGCAGTTATAGCCGTTGCTGTTCCAATTGAACGTGGAGTT 3638 Query 35724 TCGATTTGTGCGCTACCCAATTTAAAACCATTCTCTAGCATGTCTTTTAGATTAACAAGA 35783 || |||| || | || | |||||| ||| || ||||| |||||| || ||| | | Sbjct 3639 TCAATTTCAGCATTTCCTATTTTAAAGCCACCTTCAAGCATTCCTTTTAAATCAACTA-A 3697 Query 35784 CAG-CAGTTAGTAAACGGCATAGCGGGTGCATAATCCATATCATGATAATGAATATCACC 35842 || || ||| | || | | |||| |||||| | ||||||||||||||| ||||| Sbjct 3698 CATACAATTAAACATTGGAAAAAATGGTGAATAATCTAAATCATGATAATGAATTTCACC 3757 Query 35843 GTCTACATGCGC 35854 | | |||| || Sbjct 3758 TTTTTCATGAGC 3769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522625883607360