Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_025431.1
Length=45718
Score E
Sequences producing significant alignments: (Bits) Value
seq31035 107 6e-19
>seq31035
Length=3922
Score = 107 bits (118), Expect = 6e-19
Identities = 293/447 (66%), Gaps = 4/447 (1%)
Strand=Plus/Minus
Query 8057 AAGAGCCATCTCATCTTTATCTATGGGTACCGAACGCCCTCCTGGCGGAAGGACTGTCCG 8116
|||| || | ||| |||||| ||||| || || || || || | || || | |
Sbjct 2327 AAGACACAGCGCATTGTTATCTTTGGGTGCCTAATGCTCTTTTGCCTGATGGTTTAGAGG 2268
Query 8117 TGATGGCGGCGTGGGGCTTCACATACAAATCGAACATCGTGTGGCACAAAATCCGCAAAG 8176
| || ||||||||| ||| || ||||||||||| | ||||| ||| | | ||||
Sbjct 2267 TTTTGAAGGCGTGGGGGTTCGAGTATAAATCGAACATAATATGGCATAAAGTTAGAAAAG 2208
Query 8177 ACGGCGGGTCAGACGGTCGCGGCGTCGGCTTTTATTTCCGGAATGTGACCGAGATTATCC 8236
| ||||| || || || | || || || ||||||||| ||||||| || || || |
Sbjct 2207 ATGGCGGCTCTGATGGAAGAGGAGTTGGTTTTTATTTCAGGAATGTAACAGAAATACTAT 2148
Query 8237 TGTTTGGGACAAAGGGAAAAAACGCCAGAACACTCGCACCCGGTCGCACCCAAGTGAACT 8296
| || || |||| ||||| || || |||| | | | ||| | || ||||| ||
Sbjct 2147 TATTCGGAACAAGAGGAAAGAATGCGCGAACCTTAGATCGCGGAAGAACTCAAGTAAATC 2088
Query 8297 ACATCTCT--TCGCAGAAGCGGGAGCACTCACGCAAACCAGATGAACTTTATCCAATCAT 8354
||||| ||||| || | || || || | || || || || | ||| || ||
Sbjct 2087 TTTTCTCTACTCGCAAAA--GAGAACATTCGAGGAAGCCTGACGAGCAGTATGAGATAAT 2030
Query 8355 CGAAGCGTGTTCGTCAGGCCCGTATCTGGAACTTTTTGGTCGCGGTATTAGAAAGGGGTG 8414
|||| || || || || ||| ||||||||||||| | || |||| | ||
Sbjct 2029 AGAAGGCTGCTCTCGTGGGCCATATTTGGAACTTTTTGGAAGAGGCCGTAGAGAAAATTG 1970
Query 8415 GGCGACTTGGGGCAATCAAGCGGACGAAAGTTATCGTCCGAACTGGCCCACCTACAAGAA 8474
| | |||||| |||||||| ||||| |||| |||| ||| || || || |
Sbjct 1969 GACAGTTTGGGGTAATCAAGCAGACGACGATTATAAGCCGACTTGGAAAACGTATAAATA 1910
Query 8475 TAATAGCGCGGCTATCGCAGCGGAGTA 8501
|||| | || ||| | ||||||||
Sbjct 1909 TAATTCGACAGCAATCCCCGCGGAGTA 1883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146122103903840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |