Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq27062 105 2e-18 >seq27062 Length=1613 Score = 105 bits (116), Expect = 2e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20050 GCCATTAAATTTTGAGATGCCAGCAACACGCTCTGCGCGTACATATTCAACGACATCCGT 20109 |||||| || |||||| ||||| ||||| || || || ||||| ||||||| ||| Sbjct 1613 GCCATTGAACTTTGAGGCCCCAGCTACACGTTCAGCACGGACATACTCAACGATATCGAC 1554 Query 20110 CTGACCACCCACCCAGCTCAGTATGCCTTTCATGAAAAGATTGCGCTCAGGCAACAGTTT 20169 | ||| |||||||||||||| | || |||||||| |||||||||||||||| |||| Sbjct 1553 ATTACCCCCCACCCAGCTCAGAACCCCCTTCATGAAGAGATTGCGCTCAGGCATACGTTT 1494 Query 20170 AAT 20172 ||| Sbjct 1493 AAT 1491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122677951112438