Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq4853 102 3e-16
seq2021 98.7 3e-15
>seq4853
Length=2014
Score = 102 bits (112), Expect = 3e-16
Identities = 85/104 (82%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct 1024 CCTATGCTGCGTGTGTTCAATAACGTGGCGCGCTACGTGGATCAGGGAGGCGGCAAACGT 965
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084
||||| || ||| ||||||| |||| || |||||| | || ||
Sbjct 964 CCAGGTGCCTTCGCCATCTATTTGGAACCCTGGCACTCGGATAT 921
>seq2021
Length=2943
Score = 98.7 bits (108), Expect = 3e-15
Identities = 84/104 (81%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||||||||| |||||||| |||||||| ||||| || |||||||||||
Sbjct 688 CCTATGCTGCGTGTGTTCAATAACGTGGCGCGCTACGTGGATCAGGGAGGCGGCAAACGT 747
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084
||||| || ||| ||||||| | || || |||||| | || ||
Sbjct 748 CCAGGCGCCTTCGCCATCTATTTAGAACCCTGGCACTCGGATAT 791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1587704135617805
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |