Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq12187 107 2e-18 >seq12187 Length=3570 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 ||| | ||||| |||||| || || || || |||||| |||| ||| ||||| Sbjct 1400 CGTATTATAGCATTTGCAGCTGTTGAGGGTATTTTCTTCAGTGGCAGTTTCGCCTCTATT 1459 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 |||||||| || || ||||| |||||||| ||||||| |||||||| ||||||||||| Sbjct 1460 TTCTGGCTTAAGAAACGTGGTCTCATGCCTGGCCTGACATTCTCCAATGAGCTGATTTCA 1519 Query 60102 CGGGACGAGGGCCTCCATCAGGAGTTTGC 60130 || ||||| ||| | ||| || ||||| Sbjct 1520 CGTGACGAAGGCTTGCATTGTGACTTTGC 1548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548311910668560