Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_028660.1
Length=61035
Score E
Sequences producing significant alignments: (Bits) Value
seq2410 93.3 2e-14
seq1262 93.3 2e-14
>seq2410
Length=3205
Score = 93.3 bits (102), Expect = 2e-14
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 10213 TGGTGGCCCTTGCTGGATTTGAACCAGCGACCTGGCGATTATGAGTCGCTCGCTCTCACC 10272
||||||||| ||||||| ||||||||||||||| ||||||||||||| | ||||| |||
Sbjct 1026 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTTTGCTCTAACC 967
Query 10273 -ACTGAGCTAAAGGGC 10287
|||||||||| ||||
Sbjct 966 AACTGAGCTAAGGGGC 951
Score = 82.4 bits (90), Expect = 3e-11
Identities = 64/75 (85%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 10213 TGGTGGCCCTTGCTGGATTTGAACCAGCGACCTGGCGATTATGAGTCGCTCGCTCTCACC 10272
||||| | | ||||||| |||||||||||||||| ||||||||||||| ||||| |||
Sbjct 2378 TGGTGCCTCCTGCTGGACTTGAACCAGCGACCTGACGATTATGAGTCGTATGCTCTAACC 2319
Query 10273 -ACTGAGCTAAAGGG 10286
|||||||||| |||
Sbjct 2318 AACTGAGCTAAGGGG 2304
>seq1262
Length=72559
Score = 93.3 bits (102), Expect = 2e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 10213 TGGTGGCCCTTGCTGGATTTGAACCAGCGACCTGGCGATTATGAGTCGCTCGCTCTCACC 10272
||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||| |||
Sbjct 63818 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACC 63877
Query 10273 -ACTGAGCTAAAGGGCCG 10289
|||||||||| ||||||
Sbjct 63878 AACTGAGCTAAGGGGCCG 63895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 195118431957586
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |