Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 89.7 6e-13
>seq2698
Length=11445
Score = 89.7 bits (98), Expect = 6e-13
Identities = 109/147 (74%), Gaps = 4/147 (3%)
Strand=Plus/Plus
Query 125484 TTGAAGGCGGTCAGCATCTTAATGTCAATGTTCT--GAATCGTGAAACGCTTCAAGATGC 125541
||||||| || || ||| | ||||| || ||||| ||| | |||| |||| |||||
Sbjct 5322 TTGAAGGTGGACAACATTTAAATGTAAACGTTCTTCGAAAAG--AAACACTTCTTGATGC 5379
Query 125542 AGTAAAACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCG 125601
|||| |||||||||||||||| || || | || ||| | ||||| || ||||| ||| |
Sbjct 5380 AGTAGAACATCCTGAAAAATACCCGCAGTTAACAATTAGGGTTTCAGGATATGCTGTTAG 5439
Query 125602 TTTTAATGCATTGACTCGCGAACAGCA 125628
||||| | || || | ||||| ||
Sbjct 5440 ATTTAACTCTTTAACACCTGAACAACA 5466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582509832874200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |