Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29] 31,049 sequences; 69,698,627 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq2698 89.7 6e-13 >seq2698 Length=11445 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/147 (74%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 125484 TTGAAGGCGGTCAGCATCTTAATGTCAATGTTCT--GAATCGTGAAACGCTTCAAGATGC 125541 ||||||| || || ||| | ||||| || ||||| ||| | |||| |||| ||||| Sbjct 5322 TTGAAGGTGGACAACATTTAAATGTAAACGTTCTTCGAAAAG--AAACACTTCTTGATGC 5379 Query 125542 AGTAAAACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTTCG 125601 |||| |||||||||||||||| || || | || ||| | ||||| || ||||| ||| | Sbjct 5380 AGTAGAACATCCTGAAAAATACCCGCAGTTAACAATTAGGGTTTCAGGATATGCTGTTAG 5439 Query 125602 TTTTAATGCATTGACTCGCGAACAGCA 125628 ||||| | || || | ||||| || Sbjct 5440 ATTTAACTCTTTAACACCTGAACAACA 5466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582509832874200