Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_028820.1
Length=162101
Score E
Sequences producing significant alignments: (Bits) Value
seq1262 91.5 2e-13
seq2410 89.7 5e-13
>seq1262
Length=72559
Score = 91.5 bits (100), Expect = 2e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 67177 TTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTATC 67236
|||||||||| | ||||| ||||||||| |||| | ||||||||||||| ||||||| |
Sbjct 63817 TTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAAC 63876
Query 67237 CATCTGAGCTAAAGGGCC 67254
|| ||||||||| |||||
Sbjct 63877 CAACTGAGCTAAGGGGCC 63894
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 67190 CTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTATCCATCTGAGCTAAA 67249
||||| ||||||||| |||| | ||||||||||||| ||||||| ||| |||||||||
Sbjct 64415 CTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACCAACTGAGCTAAG 64474
Query 67250 GGGCCTTTGTTTA 67262
| |||||| ||||
Sbjct 64475 GAGCCTTTATTTA 64487
>seq2410
Length=3205
Score = 89.7 bits (98), Expect = 5e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 67177 TTGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTATC 67236
|||||||||| | ||||| ||||||||| |||| | ||||||||||||| ||||||| |
Sbjct 1027 TTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTTTGCTCTAAC 968
Query 67237 CATCTGAGCTAAAGGGC 67253
|| ||||||||| ||||
Sbjct 967 CAACTGAGCTAAGGGGC 951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518393926720440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |