Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_029000.1
Length=162327
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 87.8 2e-12
>seq2789
Length=15484
Score = 87.8 bits (96), Expect = 2e-12
Identities = 201/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 41515 AATGTCAGGGTACATTCGCTTGGCTGAACATTCCAGAGCAAGGTGTTTAATTTCATAGTT 41574
||| ||||| |||||||| | | ||||||||| || || || ||||| || ||||| ||
Sbjct 3131 AATATCAGGATACATTCGTTGTGTTGAACATTCAAGCGCCAGTTGTTTTATATCATAATT 3190
Query 41575 TGGATCTCCAGGATTTAAGTTTATACCAGCTTCCATGAACATAACGAGTTTTGGAAATAC 41634
||||| | | | || ||| | || ||| ||| | ||| ||||||||||||||
Sbjct 3191 AGGATCGCTATTAATTCTATTTGTCCCTTCTTTTATGGCAAAAACAAGTTTTGGAAATAC 3250
Query 41635 TGGTGTGATGCCATTCTTTCCAAGACCCTTGATTCGTACTTTCAAAATAGCTTTTTGAAT 41694
|| || | ||| ||||| | || || |||| | | || || | |||||||||
Sbjct 3251 TGCCGTTTTTTTATTTTTTCCTAACCCATTTATTCTGTTTCTTAATATTGATTTTTGAAT 3310
Query 41695 TTCTTTTTCGAACCAGTTAGTTCCCATCCCAAATGTAATTGTCACGAACGGTGTTTGGCC 41754
| | |||| || |||| | ||||| || || || || || ||||| ||
Sbjct 3311 TAATCTTTCCTCTTTTGTAATTCCAAGTCCAAAACCAAAAGTAACAAATGGGGTTTGTCC 3370
Query 41755 ATTCGTGGTGAACATCGTGTTGACTTCGTATTCGAAAGCTTGCATACCGTCATAGATTTC 41814
||| | ||| || || || | ||| ||||| || |||| | | | ||| | |||
Sbjct 3371 ATTTGCGGTATGCAAAGTATTAATTTCATATTCTAATCCTTGAAAAGCATCAAAACATTC 3430
Query 41815 TTT 41817
|||
Sbjct 3431 TTT 3433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 519116846037480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |