Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_029009.1
Length=147589
Score E
Sequences producing significant alignments: (Bits) Value
seq2789 138 1e-27
>seq2789
Length=15484
Score = 138 bits (152), Expect = 1e-27
Identities = 317/469 (68%), Gaps = 14/469 (3%)
Strand=Plus/Plus
Query 37561 ACCTAAATAACCACATTGTCTT-TTAACA-ACAT-CACATGTTGCAGGGTCATTATTACC 37617
||||||||| |||||| |||| ||| || | || | | ||||| |||| ||||||
Sbjct 2165 ACCTAAATATCCACATACTCTTCTTATCACAGATACTTTTCTTGCA---TCATGATTACC 2221
Query 37618 ACATTGCGGGCATTCATAACCATCTGATGTAGGGTTAAACTCTCCATCAAAACCGCATTC 37677
||| || || | |||| | ||| | ||| || || | | | || |||||
Sbjct 2222 ACAACTAGGACAAGAAAAACCCTTACTTGTGCAATCAAATTCGCCTTTATATCCACATTC 2281
Query 37678 ATGACATTTATCAATTGGGGTGTTTGTTCCAAGATAAC---CAACTTTATCGTAGCTGTA 37734
|| ||| | |||||||| || ||||||||| |||| ||| ||||| | || |
Sbjct 2282 ATAACACTCGTCAATTGGAGTATTTGTTCCATAATAAGGCACAAATTTAT---AACTAAA 2338
Query 37735 GTCCCAAACAGCTTCTAACGCCTTAAGGTTGTGAACTAGTTTAGGGTATTCTACATAATG 37794
||||||||| ||||||| || |||| || | | ||||| ||||| | |||
Sbjct 2339 ATCCCAAACATCTTCTAATGCTTTAATATTTTTTCTCATATTAGGATATTCACCGTAACA 2398
Query 37795 GATAAAACCACCGGAAGCATATTTTGGAAACTCTTTTTCAAAATCAATCTTTTCAAAAGG 37854
||||| ||||| ||| ||| |||| | |||||||||| ||| |||||| | ||
Sbjct 2399 AATAAAGCCACCATTTGCAAATTCTGGATATGATTTTTCAAAAAGAATTTTTTCATATGG 2458
Query 37855 TGTTGGAGCTTTGCGAACATCATAGTGGAAGCTATTTGTATAATATTCTTTATCTGTGAT 37914
|| | ||| |||||| ||||||| |||||||||||||| | || ||||| |
Sbjct 2459 ATTTACTGATTTTTTAACATCCAAGTGGAAACTATTTGTATAATAATTCTTGTCTGTAAC 2518
Query 37915 ATTCTCAATAACTCCGTATTTTTCTGTATCCATGCGACAGAATCTATCAGTTAAACTTTC 37974
| | ||||| || ||| || | |||| | | || ||||||||| | | ||||
Sbjct 2519 ACCTTTAATAATGCCAAATTCTTTTTTATCTAATTGGCAAAATCTATCACAAAGATTTTC 2578
Query 37975 ACTTGGTGTTGAGTAGATA-GAGAACCAGATTCCTGTTTCTTTTGTCCA 38022
|||||| || || | | | ||||| | ||||||||| ||| ||||
Sbjct 2579 ACTTGGCGTGCTATATAAACTAAAACCATA-TCCTGTTTCATTTTTCCA 2626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471973550043960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |