Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_029013.1
Length=177688
Score E
Sequences producing significant alignments: (Bits) Value
seq2698 109 6e-19
seq1262 84.2 2e-11
>seq2698
Length=11445
Score = 109 bits (120), Expect = 6e-19
Identities = 135/185 (73%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 67756 GTAAAGGTTCTGGCGATAACGTCGCGCTGTTGTTCTGGAGTCAGTGCATTAAAGCGAACT 67815
|| || ||||||| ||||| || | |||||||| || || | | ||||| | |||
Sbjct 5493 GTGAAAGTTCTGGTAATAACATCTTGTTGTTGTTCAGGTGTTAAAGAGTTAAATCTAACA 5434
Query 67816 GCGTAACCTGAAACGCGGATCGTTAACTGTGGGTACTTCTCAGGATGTTTCACAGCATCT 67875
|| || |||||||| | || |||||||| ||||| || |||||||||| || |||||
Sbjct 5433 GCATATCCTGAAACCCTAATTGTTAACTGCGGGTATTTTTCAGGATGTTCTACTGCATCA 5374
Query 67876 TCCAGGGTTTCGCGACGTAGCACATTCACGTTTAGGTGCTGTCCACCTTCAACTTTAACA 67935
|| ||||| || || || || || |||| || ||||||||||||||| | |||
Sbjct 5373 AGAAGTGTTTCTTTTCGAAGAACGTTTACATTTAAATGTTGTCCACCTTCAACTCTTACA 5314
Query 67936 GTCGG 67940
|| ||
Sbjct 5313 GTAGG 5309
>seq1262
Length=72559
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 23899 TATGGCTGGAAATTACGGAAATGTGTTGCATGTAATGGGTCTGGGCGATATGATAACTAC 23958
||||| | ||||| | ||||||||||| ||||| || ||||| | ||||| | |
Sbjct 130 TATGGATTTAAATTGAGAAAATGTGTTGCTTGTAACGGTTCTGGAAGGTATGACAGTCAT 71
Query 23959 GGATCGCCAAAATGCAGTTCATGCAACGGCACTGGAAAAGAACGTTATAAA 24009
| || |||||||| ||||| || || || |||||||||||||| ||||||
Sbjct 70 CGTTCACCAAAATGTAGTTCTTGTAATGGAACTGGAAAAGAACGATATAAA 20
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568252968289920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |