Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Liriomyza_20trifolii_20[genbank_20GCA_5F001014935.1_202015-05-29]
31,049 sequences; 69,698,627 total letters
Query= NC_029042.1
Length=156833
Score E
Sequences producing significant alignments: (Bits) Value
seq2410 100 3e-16
seq1262 100 3e-16
>seq2410
Length=3205
Score = 100 bits (110), Expect = 3e-16
Identities = 72/82 (88%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 19435 TTATTTAGTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTG 19494
||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||||| ||
Sbjct 1034 TTATTTATTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTTTG 975
Query 19495 CTCTAACC-ACTGAGCTACGGG 19515
|||||||| ||||||||| |||
Sbjct 974 CTCTAACCAACTGAGCTAAGGG 953
Score = 84.2 bits (92), Expect = 2e-11
Identities = 57/63 (90%), Gaps = 1/63 (2%)
Strand=Plus/Minus
Query 19454 GCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC-ACTGAGCTAC 19512
||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||||
Sbjct 1846 GCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACCAACTGAGCTAA 1787
Query 19513 GGG 19515
|||
Sbjct 1786 GGG 1784
>seq1262
Length=72559
Score = 100 bits (110), Expect = 3e-16
Identities = 72/82 (88%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 19435 TTATTTAGTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTG 19494
||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||||| ||
Sbjct 63810 TTATTTATTGGTGGCCCCTGCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTG 63869
Query 19495 CTCTAACC-ACTGAGCTACGGG 19515
|||||||| ||||||||| |||
Sbjct 63870 CTCTAACCAACTGAGCTAAGGG 63891
Score = 82.4 bits (90), Expect = 8e-11
Identities = 56/62 (90%), Gaps = 1/62 (2%)
Strand=Plus/Plus
Query 19454 GCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC-ACTGAGCTAC 19512
||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||||
Sbjct 64414 GCTGGACTTGAACCAGCGACCTAACGATTATGAGTCGTGTGCTCTAACCAACTGAGCTAA 64473
Query 19513 GG 19514
||
Sbjct 64474 GG 64475
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 501542869365720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |